C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117450 Bnip2-003 ENSMUSG00000011958 10090 + 9:69989515-70004007 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000117450
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000117450 8.349±1.20 5.329±1.05 5.532±1.73 2.698±0.00 3.666±0.00 2.954±0.32 1.989±0.00 7.104±0.99 7.894±1.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0005814 IDA centriole
GO:0005829 IBA cytosol
GO:0006915 IBA apoptotic process
GO:0031616 IDA spindle pole centrosome
GO:0042802 IBA identical protein binding
GO:0043410 IMP positive regulation of MAPK cascade
GO:0045666 IMP positive regulation of neuron differentiation
GO:0051057 IMP positive regulation of small GTPase mediated signal transduction
GO:0051146 IGI striated muscle cell differentiation
GO:0051297 IMP centrosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267859 BNIP2-001 protein_coding Homo_sapiens 0 1212
ENST00000415213 BNIP2-008 protein_coding Homo_sapiens 0 1048
ENST00000417312 BNIP2-003 processed_transcript Homo_sapiens 0 518
ENST00000477543 BNIP2-002 retained_intron Homo_sapiens 0 518
ENST00000560458 BNIP2-011 retained_intron Homo_sapiens 0 725
ENST00000607373 BNIP2-012 protein_coding Homo_sapiens 0 1212
ENST00000612191 BNIP2-201 protein_coding Homo_sapiens 0 1212

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