C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034754 Bnip2-001 ENSMUSG00000011958 10090 + 9:69989466-70008317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034754
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034754 2.650±0.00 5.362±1.51 22.014±0.74 4.006±1.27 4.807±0.38 2.181±0.17 5.832±0.88 1.954±0.20 5.282±1.51 4.841±0.25 19.777±2.67 9.320±4.54 5.387±2.04 2.672±0.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0005515 IEA protein binding
GO:0005635 ISS nuclear envelope
GO:0005737 IEA cytoplasm
GO:0005814 IDA centriole
GO:0005829 IBA cytosol
GO:0006915 IBA apoptotic process
GO:0031616 IDA spindle pole centrosome
GO:0042802 IBA identical protein binding
GO:0043231 ISS intracellular membrane-bounded organelle
GO:0043410 IMP positive regulation of MAPK cascade
GO:0045666 IMP positive regulation of neuron differentiation
GO:0051057 IMP positive regulation of small GTPase mediated signal transduction
GO:0051146 IGI striated muscle cell differentiation
GO:0051297 IMP centrosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267859 BNIP2-001 protein_coding Homo_sapiens 0 1236
ENST00000415213 BNIP2-008 protein_coding Homo_sapiens 0 1050
ENST00000417312 BNIP2-003 processed_transcript Homo_sapiens 0 518
ENST00000439052 BNIP2-006 protein_coding Homo_sapiens 0 1009
ENST00000477543 BNIP2-002 retained_intron Homo_sapiens 0 518
ENST00000478981 BNIP2-007 processed_transcript Homo_sapiens 2e-24 119
ENST00000560458 BNIP2-011 retained_intron Homo_sapiens 0 741
ENST00000607373 BNIP2-012 protein_coding Homo_sapiens 0 1214
ENST00000612191 BNIP2-201 protein_coding Homo_sapiens 0 1236

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