C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin tyrosine ligase-like family, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000012609 Ttll5 10090 + 12:85824659-86061893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040179 Ttll5-001 85824710-86053760 protein_coding
  ENSMUST00000040273 Ttll5-009 85824969-86053208 protein_coding
  ENSMUST00000095536 Ttll5-004 85824673-85894745 protein_coding
  ENSMUST00000110220 Ttll5-003 85824707-85884438 protein_coding
  ENSMUST00000110224 Ttll5-008 85824978-86053759 protein_coding
  ENSMUST00000124701 Ttll5-005 85825021-85845682 retained_intron
  ENSMUST00000142411 Ttll5-007 85824985-85843787 protein_coding
  ENSMUST00000153570 Ttll5-006 85825021-85849317 nonsense_mediated_decay
  ENSMUST00000155448 Ttll5-002 85825075-86053759 nonsense_mediated_decay
  ENSMUST00000175844 Ttll5-015 85939389-86061893 nonsense_mediated_decay
  ENSMUST00000175899 Ttll5-017 85878986-85892199 retained_intron
  ENSMUST00000176008 Ttll5-012 85824978-85870056 processed_transcript
  ENSMUST00000176460 Ttll5-018 85912560-85929939 protein_coding
  ENSMUST00000176695 Ttll5-010 85824968-86016052 nonsense_mediated_decay
  ENSMUST00000176937 Ttll5-019 85923008-86012800 protein_coding
  ENSMUST00000177114 Ttll5-011 85826484-86053209 nonsense_mediated_decay
  ENSMUST00000177168 Ttll5-013 85917779-86053759 protein_coding
  ENSMUST00000177188 Ttll5-016 85824659-85857405 protein_coding
  ENSMUST00000177525 Ttll5-014 85932782-86053759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040179ENSMUST00000040273ENSMUST00000110224ENSMUST00000155448ENSMUST00000176460ENSMUST00000176937ENSMUST00000177114ENSMUST00000177168ENSMUST00000177525
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040179 0.764±0.22 0.673±0.17 0.932±0.07 2.416±0.59 0.587±0.29 0.495±0.20 0.481±0.10 0.926±0.15 1.005±0.58 1.011±0.11 0.450±0.12 1.404±0.91 5.341±2.02 27.029±4.19
ENSMUST00000040273 1.080±0.00 0.742±0.00 N/A N/A 0.524±0.09 N/A 0.640±0.00 N/A 0.492±0.02 N/A 0.350±0.14 1.180±0.29 3.494±0.93 31.044±0.00
ENSMUST00000110224 0.643±0.12 N/A 0.489±0.08 N/A 0.678±0.00 0.326±0.00 0.456±0.00 0.644±0.24 0.520±0.09 0.658±0.04 0.201±0.00 1.048±0.42 2.075±1.22 7.613±0.39
ENSMUST00000155448 0.400±0.00 N/A 0.284±0.00 N/A 0.497±0.10 N/A N/A N/A 0.324±0.06 0.610±0.00 0.353±0.03 1.553±0.86 1.957±0.00 N/A
ENSMUST00000176460 N/A N/A N/A 22.032±0.00 N/A N/A N/A N/A N/A N/A N/A 19.901±0.00 47.242±15.40 330.236±0.00
ENSMUST00000176937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.653±0.00 N/A
ENSMUST00000177114 N/A 0.832±0.00 N/A N/A 0.390±0.00 0.452±0.12 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A
ENSMUST00000177525 2.781±0.37 4.934±0.84 1.048±0.17 N/A 3.110±0.32 3.899±1.22 1.882±0.24 3.177±0.59 1.821±0.47 3.296±0.26 0.539±0.00 5.361±1.16 2.650±0.28 37.116±4.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WU CIL_0004WU_0002 CGP 12:85815448-86061893
CIL_000061 CIL_000061_0002 CGP 12:85824659-86079041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005929 IEA cilium
GO:0006351 IEA transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0007288 IMP sperm axoneme assembly
GO:0009566 IMP fertilization
GO:0016874 IEA ligase activity
GO:0018095 IMP protein polyglutamylation
GO:0030317 IMP sperm motility

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089650 TTLL5 tubulin tyrosine ligase-like family, member 5 protein_coding Danio_rerio
ENSG00000119685 TTLL5 tubulin tyrosine ligase-like family, member 5 protein_coding Homo_sapiens

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