C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155448 Ttll5-002 ENSMUSG00000012609 10090 + 12:85825075-86053759 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverLungMuscleOvaryPlacentaENSMUST00000155448
Transcript ID Adipose Bladder Breast Liver Lung Muscle Ovary Placenta
ENSMUST00000155448 0.400±0.00 0.284±0.00 0.497±0.10 0.324±0.06 0.610±0.00 0.353±0.03 1.553±0.86 1.957±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WU CIL_0004WU_0002 CGP 12:85815448-86061893
CIL_000061 CIL_000061_0002 CGP 12:85824659-86079041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005929 IEA cilium
GO:0006351 IEA transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0007288 IMP sperm axoneme assembly
GO:0009566 IMP fertilization
GO:0016874 IEA ligase activity
GO:0018095 IMP protein polyglutamylation
GO:0030317 IMP sperm motility

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286650 TTLL5-003 protein_coding Homo_sapiens 0 1129
ENST00000298832 TTLL5-001 protein_coding Homo_sapiens 0 2386
ENST00000554148 TTLL5-011 processed_transcript Homo_sapiens 0 584
ENST00000554487 TTLL5-020 processed_transcript Homo_sapiens 6e-23 111
ENST00000554510 TTLL5-018 protein_coding Homo_sapiens 0 2058
ENST00000554878 TTLL5-012 processed_transcript Homo_sapiens 3e-29 132
ENST00000554935 TTLL5-010 processed_transcript Homo_sapiens 0 684
ENST00000554972 TTLL5-019 processed_transcript Homo_sapiens 2e-39 167
ENST00000555290 TTLL5-007 processed_transcript Homo_sapiens 0 680
ENST00000555422 TTLL5-005 processed_transcript Homo_sapiens 0 702
ENST00000555677 IFT43-006 retained_intron Homo_sapiens 5e-23 111
ENST00000556173 TTLL5-004 retained_intron Homo_sapiens 0 948
ENST00000556685 TTLL5-009 processed_transcript Homo_sapiens 0 311
ENST00000556893 TTLL5-017 protein_coding Homo_sapiens 0 2058
ENST00000556976 TTLL5-013 processed_transcript Homo_sapiens 0 427
ENST00000556977 TTLL5-002 protein_coding Homo_sapiens 0 584
ENST00000557219 TTLL5-021 processed_transcript Homo_sapiens 0 261
ENST00000557636 TTLL5-016 protein_coding Homo_sapiens 0 2078

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