C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000061_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089650-ENSDARG00000019367 CGP 7955 17:52467520-52620507
GeneTranscriptPositionBiotype
ENSDARG00000019367 (tgfb3)
transforming growth factor, beta 3 		ENSDART00000019766 (tgfb3-001) 52587615-52620507 protein_coding
ENSDART00000138632 (tgfb3-002) 52588144-52590490 retained_intron
ENSDARG00000036793 (ttll5)
tubulin tyrosine ligase-like family, member 5 		ENSDART00000053422 (ttll5-201) 52523243-52583015 lincRNA
ENSDART00000144357 (ttll5-001) 52577176-52583086 lincRNA
ENSDARG00000089650 (TTLL5)
tubulin tyrosine ligase-like family, member 5 		ENSDART00000103339 (TTLL5-201) 52467520-52485339 protein_coding
CIL_000061_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000012609-ENSMUSG00000021253 CGP 10090 12:85824659-86079041
GeneTranscriptPositionBiotype
ENSMUSG00000012609 (Ttll5)
tubulin tyrosine ligase-like family, member 5 		ENSMUST00000040179 (Ttll5-001) 85824710-86053760 protein_coding
ENSMUST00000040273 (Ttll5-009) 85824969-86053208 protein_coding
ENSMUST00000095536 (Ttll5-004) 85824673-85894745 protein_coding
ENSMUST00000110220 (Ttll5-003) 85824707-85884438 protein_coding
ENSMUST00000110224 (Ttll5-008) 85824978-86053759 protein_coding
ENSMUST00000124701 (Ttll5-005) 85825021-85845682 retained_intron
ENSMUST00000142411 (Ttll5-007) 85824985-85843787 protein_coding
ENSMUST00000153570 (Ttll5-006) 85825021-85849317 nonsense_mediated_decay
ENSMUST00000155448 (Ttll5-002) 85825075-86053759 nonsense_mediated_decay
ENSMUST00000175844 (Ttll5-015) 85939389-86061893 nonsense_mediated_decay
ENSMUST00000175899 (Ttll5-017) 85878986-85892199 retained_intron
ENSMUST00000176008 (Ttll5-012) 85824978-85870056 processed_transcript
ENSMUST00000176460 (Ttll5-018) 85912560-85929939 protein_coding
ENSMUST00000176695 (Ttll5-010) 85824968-86016052 nonsense_mediated_decay
ENSMUST00000176937 (Ttll5-019) 85923008-86012800 protein_coding
ENSMUST00000177114 (Ttll5-011) 85826484-86053209 nonsense_mediated_decay
ENSMUST00000177168 (Ttll5-013) 85917779-86053759 protein_coding
ENSMUST00000177188 (Ttll5-016) 85824659-85857405 protein_coding
ENSMUST00000177525 (Ttll5-014) 85932782-86053759 protein_coding
ENSMUSG00000021253 (Tgfb3)
transforming growth factor, beta 3 		ENSMUST00000003687 (Tgfb3-201) 86056744-86079041 protein_coding
ENSMUSG00000097902 (Gm26531)
predicted gene, 26531 		ENSMUST00000181727 (Gm26531-201) 85962598-85979014 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000061_0001ENSDARG00000019367ENSDART00000019766ENSDART00000138632ENSDARG00000036793ENSDART00000053422ENSDART00000144357ENSDARG00000089650ENSDART00000103339CIL_000061_0002ENSMUSG00000012609ENSMUST00000040179ENSMUST00000040273ENSMUST00000095536ENSMUST00000110220ENSMUST00000110224ENSMUST00000124701ENSMUST00000142411ENSMUST00000153570ENSMUST00000155448ENSMUST00000175844ENSMUST00000175899ENSMUST00000176008ENSMUST00000176460ENSMUST00000176695ENSMUST00000176937ENSMUST00000177114ENSMUST00000177168ENSMUST00000177188ENSMUST00000177525ENSMUSG00000021253ENSMUST00000003687ENSMUSG00000097902ENSMUST00000181727
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000061_0001ENSDARG00000019367ENSDART00000019766ENSDART00000138632ENSDARG00000036793ENSDART00000053422ENSDART00000144357ENSDARG00000089650ENSDART00000103339CIL_000061_0002ENSMUSG00000012609ENSMUST00000040179ENSMUST00000040273ENSMUST00000110224ENSMUST00000155448ENSMUST00000176460ENSMUST00000176937ENSMUST00000177114ENSMUST00000177168ENSMUST00000177525ENSMUSG00000021253ENSMUST00000003687ENSMUSG00000097902ENSMUST00000181727
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019367 ENSDART00000019766 N/A N/A N/A 1.360±0.63 N/A N/A 32.792±7.08 1.989±1.18 0.319±0.00 N/A 4.598±0.00 N/A N/A N/A
ENSDART00000138632 N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A
ENSDARG00000036793 ENSDART00000053422 N/A N/A N/A 0.932±0.00 N/A N/A 0.221±0.05 0.197±0.00 0.027±0.00 N/A 0.170±0.00 N/A N/A N/A
ENSDART00000144357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A
ENSDARG00000089650 ENSDART00000103339 N/A N/A N/A 0.818±0.00 N/A N/A 0.374±0.28 1.095±0.00 0.185±0.00 N/A 0.175±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012609 ENSMUST00000040179 0.764±0.22 0.673±0.17 0.932±0.07 2.416±0.59 0.587±0.29 0.495±0.20 0.481±0.10 0.926±0.15 1.005±0.58 1.011±0.11 0.450±0.12 1.404±0.91 5.341±2.02 27.029±4.19
ENSMUST00000040273 1.080±0.00 0.742±0.00 N/A N/A 0.524±0.09 N/A 0.640±0.00 N/A 0.492±0.02 N/A 0.350±0.14 1.180±0.29 3.494±0.93 31.044±0.00
ENSMUST00000095536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110224 0.643±0.12 N/A 0.489±0.08 N/A 0.678±0.00 0.326±0.00 0.456±0.00 0.644±0.24 0.520±0.09 0.658±0.04 0.201±0.00 1.048±0.42 2.075±1.22 7.613±0.39
ENSMUST00000124701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155448 0.400±0.00 N/A 0.284±0.00 N/A 0.497±0.10 N/A N/A N/A 0.324±0.06 0.610±0.00 0.353±0.03 1.553±0.86 1.957±0.00 N/A
ENSMUST00000175844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176460 N/A N/A N/A 22.032±0.00 N/A N/A N/A N/A N/A N/A N/A 19.901±0.00 47.242±15.40 330.236±0.00
ENSMUST00000176695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.653±0.00 N/A
ENSMUST00000177114 N/A 0.832±0.00 N/A N/A 0.390±0.00 0.452±0.12 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A
ENSMUST00000177188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177525 2.781±0.37 4.934±0.84 1.048±0.17 N/A 3.110±0.32 3.899±1.22 1.882±0.24 3.177±0.59 1.821±0.47 3.296±0.26 0.539±0.00 5.361±1.16 2.650±0.28 37.116±4.44
ENSMUSG00000021253 ENSMUST00000003687 12.596±1.72 5.311±0.39 21.238±2.93 4.816±2.05 13.717±2.98 6.271±0.54 5.920±0.43 1.397±0.23 0.899±0.54 15.800±0.82 7.827±0.44 21.337±5.08 16.622±5.43 2.128±1.01
ENSMUSG00000097902 ENSMUST00000181727 0.018±0.00 0.042±0.00 0.009±0.00 0.043±0.02 0.083±0.05 0.034±0.00 0.028±0.01 0.052±0.02 0.029±0.02 0.043±0.02 0.020±0.00 0.082±0.05 0.072±0.04 0.065±0.04

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