C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transport and golgi organization 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000013539 Tango2 10090 - 16:18300825-18348103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115628 Tango2-001 18300827-18343927 protein_coding
  ENSMUST00000125287 Tango2-004 18310888-18348103 nonsense_mediated_decay
  ENSMUST00000128580 Tango2-002 18300825-18324450 nonsense_mediated_decay
  ENSMUST00000130752 Tango2-010 18310896-18343902 protein_coding
  ENSMUST00000134385 Tango2-003 18320851-18348083 retained_intron
  ENSMUST00000142677 Tango2-009 18307987-18311453 processed_transcript
  ENSMUST00000145203 Tango2-006 18312425-18324451 retained_intron
  ENSMUST00000145758 Tango2-007 18301223-18304145 retained_intron
  ENSMUST00000150152 Tango2-005 18316310-18324451 retained_intron
  ENSMUST00000152684 Tango2-008 18310780-18313034 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115628ENSMUST00000128580ENSMUST00000130752ENSMUST00000145758
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115628 7.802±1.62 14.601±2.83 9.764±2.10 21.648±1.01 10.296±7.22 10.015±5.54 86.887±11.72 49.884±12.09 28.766±9.05 9.232±2.01 9.391±4.07 7.102±2.59 16.772±14.30 2.971±1.19
ENSMUST00000128580 1.995±0.00 8.073±2.15 2.445±0.00 N/A 4.634±0.51 4.649±1.35 N/A N/A 5.267±0.00 N/A 2.426±0.00 3.931±2.58 2.650±0.00 1.079±0.00
ENSMUST00000130752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.434±0.00 4.963±0.00 14.114±0.00
ENSMUST00000145758 N/A 7.406±0.32 N/A 16.448±0.00 4.848±0.99 6.553±0.07 N/A N/A N/A N/A N/A 4.324±0.81 5.410±0.81 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056550 tango2 transport and golgi organization 2 homolog (Drosophila) protein_coding Danio_rerio
ENSG00000183597 TANGO2 transport and golgi organization 2 homolog (Drosophila) protein_coding Homo_sapiens

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