C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transport and golgi organization 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115628 Tango2-001 ENSMUSG00000013539 10090 - 16:18300827-18343927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115628
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115628 7.802±1.62 14.601±2.83 9.764±2.10 21.648±1.01 10.296±7.22 10.015±5.54 86.887±11.72 49.884±12.09 28.766±9.05 9.232±2.01 9.391±4.07 7.102±2.59 16.772±14.30 2.971±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327374 TANGO2-003 protein_coding Homo_sapiens 0 856
ENST00000398042 TANGO2-007 protein_coding Homo_sapiens 0 392
ENST00000399807 TANGO2-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000401833 TANGO2-005 protein_coding Homo_sapiens 2e-22 111
ENST00000401886 TANGO2-001 protein_coding Homo_sapiens 0 348
ENST00000411907 TANGO2-010 processed_transcript Homo_sapiens 0 392
ENST00000420290 TANGO2-201 protein_coding Homo_sapiens 0 392
ENST00000430807 TANGO2-012 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000432198 TANGO2-006 protein_coding Homo_sapiens 0 348
ENST00000432883 TANGO2-202 protein_coding Homo_sapiens 0 392
ENST00000434168 TANGO2-014 protein_coding Homo_sapiens 0 717
ENST00000434570 TANGO2-203 protein_coding Homo_sapiens 1e-35 156
ENST00000444651 TANGO2-015 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000447208 TANGO2-204 protein_coding Homo_sapiens 0 470
ENST00000450019 TANGO2-002 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000450664 TANGO2-011 protein_coding Homo_sapiens 0 623
ENST00000456048 TANGO2-205 protein_coding Homo_sapiens 1e-35 156
ENST00000462579 TANGO2-019 retained_intron Homo_sapiens 0 348
ENST00000471707 TANGO2-018 retained_intron Homo_sapiens 0 348
ENST00000475446 TANGO2-009 processed_transcript Homo_sapiens 0 220
ENST00000479679 TANGO2-008 processed_transcript Homo_sapiens 0 220
ENST00000484373 TANGO2-021 retained_intron Homo_sapiens 0 468
ENST00000485715 TANGO2-013 processed_transcript Homo_sapiens 0 470

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