C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 87B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014353 Tmem87b 10090 + 2:128818118-128854261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110325 Tmem87b-001 128818118-128854261 protein_coding
  ENSMUST00000126160 Tmem87b-003 128841153-128849725 retained_intron
  ENSMUST00000143398 Tmem87b-004 128831622-128850316 processed_transcript
  ENSMUST00000143686 Tmem87b-005 128849960-128851411 processed_transcript
  ENSMUST00000152210 Tmem87b-002 128818384-128851792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110325ENSMUST00000126160ENSMUST00000143398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110325 5.675±2.11 11.054±5.45 11.508±0.90 5.690±0.43 4.233±0.52 5.432±2.41 1.972±0.95 3.904±1.90 2.487±1.60 6.145±1.37 1.629±0.72 5.181±2.63 11.085±4.51 0.842±0.56
ENSMUST00000126160 N/A N/A N/A 1.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143398 N/A N/A N/A 5.285±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.267±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038G CIL_00038G_0003 CGP 2:128698956-128854261
CIL_00047Q CIL_00047Q_0002 CGP 2:128818118-128897034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052607 TMEM87B (1 of 2) transmembrane protein 87B protein_coding Danio_rerio
ENSDARG00000079533 TMEM87B (2 of 2) transmembrane protein 87B protein_coding Danio_rerio
ENSG00000153214 TMEM87B transmembrane protein 87B protein_coding Homo_sapiens

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