C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 87B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110325 Tmem87b-001 ENSMUSG00000014353 10090 + 2:128818118-128854261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110325 5.675±2.11 11.054±5.45 11.508±0.90 5.690±0.43 4.233±0.52 5.432±2.41 1.972±0.95 3.904±1.90 2.487±1.60 6.145±1.37 1.629±0.72 5.181±2.63 11.085±4.51 0.842±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038G CIL_00038G_0003 CGP 2:128698956-128854261
CIL_00047Q CIL_00047Q_0002 CGP 2:128818118-128897034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283206 TMEM87B-001 protein_coding Homo_sapiens 0 1921
ENST00000452029 TMEM87B-003 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000452614 TMEM87B-002 protein_coding Homo_sapiens 0 298
ENST00000463427 TMEM87B-004 processed_transcript Homo_sapiens 0 749
ENST00000471632 TMEM87B-005 processed_transcript Homo_sapiens 0 442

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