C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kinesin family member 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014602 Kif1a 10090 - 1:93015464-93101951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086819 Kif1a-005 93018457-93082421 protein_coding
  ENSMUST00000112958 Kif1a-006 93017751-93101831 protein_coding
  ENSMUST00000171556 Kif1a-002 93018280-93101847 protein_coding
  ENSMUST00000171796 Kif1a-001 93015464-93101822 protein_coding
  ENSMUST00000186828 Kif1a-010 93042498-93054302 nonsense_mediated_decay
  ENSMUST00000186861 Kif1a-007 93077724-93101834 protein_coding
  ENSMUST00000188136 Kif1a-012 93022321-93024708 nonsense_mediated_decay
  ENSMUST00000188493 Kif1a-008 93039043-93101846 processed_transcript
  ENSMUST00000190249 Kif1a-009 93066132-93068758 processed_transcript
  ENSMUST00000190723 Kif1a-003 93017940-93101951 protein_coding
  ENSMUST00000190854 Kif1a-011 93023493-93027205 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086819ENSMUST00000112958ENSMUST00000171556ENSMUST00000171796ENSMUST00000188136ENSMUST00000188493ENSMUST00000190723
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086819 N/A N/A N/A 58.369±0.00 0.358±0.00 N/A N/A N/A 0.033±0.02 N/A N/A 0.728±0.25 0.354±0.01 2.433±0.00
ENSMUST00000112958 N/A 2.940±0.00 N/A N/A N/A 0.661±0.00 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A
ENSMUST00000171556 0.962±0.73 6.837±2.06 0.585±0.00 12.381±1.22 0.861±0.22 1.598±0.08 0.280±0.01 0.188±0.04 0.039±0.03 0.703±0.16 0.129±0.00 2.242±0.53 0.039±0.01 2.676±1.25
ENSMUST00000171796 N/A 6.217±3.97 N/A 71.335±60.36 N/A 0.719±0.18 0.107±0.00 0.138±0.05 0.023±0.01 N/A 0.159±0.05 0.565±0.28 0.033±0.00 0.841±0.14
ENSMUST00000188136 N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A
ENSMUST00000188493 N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A 0.144±0.00 N/A
ENSMUST00000190723 N/A 2.379±0.17 N/A N/A N/A N/A N/A 0.085±0.01 0.035±0.00 0.122±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TM CIL_0007TM_0002 VISTA 1:92418794-93021273
CIL_0009AE CIL_0009AE_0002 VISTA 1:92485614-93089442
CIL_0003K7 CIL_0003K7_0002 CGP 1:93006334-93101951
CIL_00046R CIL_00046R_0002 CGP 1:93015464-93145421

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0007018 IBA microtubule-based movement
GO:0008017 IDA microtubule binding
GO:0008152 IBA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016192 IBA vesicle-mediated transport
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061817 kif1aa kinesin family member 1Aa protein_coding Danio_rerio
ENSDARG00000062024 kif1ab kinesin family member 1Ab protein_coding Danio_rerio
ENSG00000130294 KIF1A kinesin family member 1A protein_coding Homo_sapiens

Loading