C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171796 Kif1a-001 ENSMUSG00000014602 10090 - 1:93015464-93101822 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000171796
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000171796 6.217±3.97 71.335±60.36 0.719±0.18 0.107±0.00 0.138±0.05 0.023±0.01 0.159±0.05 0.565±0.28 0.033±0.00 0.841±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TM CIL_0007TM_0002 VISTA 1:92418794-93021273
CIL_0009AE CIL_0009AE_0002 VISTA 1:92485614-93089442
CIL_0003K7 CIL_0003K7_0002 CGP 1:93006334-93101951
CIL_00046R CIL_00046R_0002 CGP 1:93015464-93145421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0007018 IBA microtubule-based movement
GO:0008017 IDA microtubule binding
GO:0008152 IBA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016192 IBA vesicle-mediated transport
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050915 kif1b-201 protein_coding Danio_rerio 0 1166
ENSDART00000141075 kif1b-002 protein_coding Danio_rerio 0 1166
ENSDART00000053807 kif1b-202 protein_coding Danio_rerio 0 364
ENSDART00000146458 kif1b-001 protein_coding Danio_rerio 0 364
ENST00000320389 KIF1A-001 protein_coding Homo_sapiens 0 6381
ENST00000404283 KIF1A-008 protein_coding Homo_sapiens 0 3203
ENST00000415042 KIF1A-012 protein_coding Homo_sapiens 0 551
ENST00000428768 KIF1A-007 protein_coding Homo_sapiens 0 780
ENST00000448728 KIF1A-006 protein_coding Homo_sapiens 2.8026e-45 185
ENST00000460788 KIF1A-005 retained_intron Homo_sapiens 0 1465
ENST00000492812 KIF1A-004 retained_intron Homo_sapiens 0 1519
ENST00000498729 KIF1A-201 protein_coding Homo_sapiens 0 3225

Loading