C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130294-ENSG00000172482 CGP 9606 2:240713764-240880502
GeneTranscriptPositionBiotype
ENSG00000130294 (KIF1A)
kinesin family member 1A 		ENST00000320389 (KIF1A-001) 240713764-240820220 protein_coding
ENST00000404283 (KIF1A-008) 240723487-240797752 protein_coding
ENST00000415042 (KIF1A-012) 240744053-240748718 protein_coding
ENST00000428768 (KIF1A-007) 240771129-240786364 protein_coding
ENST00000431776 (KIF1A-013) 240722544-240743993 protein_coding
ENST00000448728 (KIF1A-006) 240789304-240818978 protein_coding
ENST00000460788 (KIF1A-005) 240713764-240724849 retained_intron
ENST00000463388 (KIF1A-009) 240769672-240771294 retained_intron
ENST00000465813 (KIF1A-016) 240720627-240722658 retained_intron
ENST00000488776 (KIF1A-015) 240719149-240720285 retained_intron
ENST00000492812 (KIF1A-004) 240717020-240725998 retained_intron
ENST00000494452 (KIF1A-014) 240726838-240737542 retained_intron
ENST00000498729 (KIF1A-201) 240713764-240820308 protein_coding
ENSG00000172482 (AGXT)
alanine-glyoxylate aminotransferase 		ENST00000307503 (AGXT-001) 240868479-240879120 protein_coding
ENST00000470255 (AGXT-002) 240876913-240880502 retained_intron
ENST00000472436 (AGXT-003) 240868846-240873468 retained_intron
ENST00000476698 (AGXT-004) 240871189-240876013 retained_intron
CIL_00046R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014602-ENSMUSG00000026272 CGP 10090 1:93015464-93145421
GeneTranscriptPositionBiotype
ENSMUSG00000014602 (Kif1a)
kinesin family member 1A 		ENSMUST00000086819 (Kif1a-005) 93018457-93082421 protein_coding
ENSMUST00000112958 (Kif1a-006) 93017751-93101831 protein_coding
ENSMUST00000171556 (Kif1a-002) 93018280-93101847 protein_coding
ENSMUST00000171796 (Kif1a-001) 93015464-93101822 protein_coding
ENSMUST00000186828 (Kif1a-010) 93042498-93054302 nonsense_mediated_decay
ENSMUST00000186861 (Kif1a-007) 93077724-93101834 protein_coding
ENSMUST00000188136 (Kif1a-012) 93022321-93024708 nonsense_mediated_decay
ENSMUST00000188493 (Kif1a-008) 93039043-93101846 processed_transcript
ENSMUST00000190249 (Kif1a-009) 93066132-93068758 processed_transcript
ENSMUST00000190723 (Kif1a-003) 93017940-93101951 protein_coding
ENSMUST00000190854 (Kif1a-011) 93023493-93027205 retained_intron
ENSMUSG00000026272 (Agxt)
alanine-glyoxylate aminotransferase 		ENSMUST00000027491 (Agxt-001) 93135240-93145421 protein_coding
ENSMUST00000190603 (Agxt-002) 93139879-93145417 processed_transcript
ENSMUST00000191039 (Agxt-003) 93135568-93138002 retained_intron
ENSMUSG00000101378 (RP23-254H20.2)
predicted gene 28086 		ENSMUST00000191586 (RP23-254H20.2-001) 93122931-93124103 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046R_0001ENSG00000130294ENST00000320389ENST00000404283ENST00000415042ENST00000428768ENST00000431776ENST00000448728ENST00000460788ENST00000463388ENST00000465813ENST00000488776ENST00000492812ENST00000494452ENST00000498729ENSG00000172482ENST00000307503ENST00000470255ENST00000472436ENST00000476698CIL_00046R_0002ENSMUSG00000014602ENSMUST00000086819ENSMUST00000112958ENSMUST00000171556ENSMUST00000171796ENSMUST00000186828ENSMUST00000186861ENSMUST00000188136ENSMUST00000188493ENSMUST00000190249ENSMUST00000190723ENSMUST00000190854ENSMUSG00000026272ENSMUST00000027491ENSMUST00000190603ENSMUST00000191039ENSMUSG00000101378ENSMUST00000191586
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046R_0001ENSG00000130294ENST00000320389ENST00000404283ENST00000428768ENST00000431776ENST00000460788ENST00000463388ENST00000465813ENST00000492812ENST00000494452ENST00000498729ENSG00000172482ENST00000307503ENST00000470255ENST00000472436ENST00000476698CIL_00046R_0002ENSMUSG00000014602ENSMUST00000086819ENSMUST00000112958ENSMUST00000171556ENSMUST00000171796ENSMUST00000188136ENSMUST00000188493ENSMUST00000190723ENSMUSG00000026272ENSMUST00000027491ENSMUST00000190603ENSMUST00000191039ENSMUSG00000101378ENSMUST00000191586
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130294 ENST00000320389 0.083±0.00 N/A 0.080±0.00 80.599±59.34 0.061±0.00 1.129±0.00 0.590±0.00 0.069±0.05 0.046±0.00 N/A 0.035±0.00 0.132±0.07 N/A 4.576±0.45
ENST00000404283 N/A N/A 0.063±0.00 9.428±0.00 N/A 0.634±0.00 N/A 0.159±0.00 0.070±0.00 0.017±0.00 0.036±0.00 0.176±0.00 0.016±0.00 N/A
ENST00000415042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428768 N/A 0.314±0.00 N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A 0.028±0.00 N/A 0.046±0.00 N/A
ENST00000431776 N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A N/A N/A 0.130±0.00 N/A
ENST00000448728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460788 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A 0.030±0.02 N/A
ENST00000463388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.903±0.00 N/A N/A
ENST00000465813 N/A N/A N/A N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A
ENST00000488776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A
ENST00000494452 N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498729 N/A N/A N/A N/A N/A 0.512±0.00 0.108±0.00 N/A 0.089±0.00 0.032±0.00 N/A N/A N/A N/A
ENSG00000172482 ENST00000307503 0.131±0.00 N/A 2.270±0.00 0.056±0.00 0.371±0.03 N/A N/A 38.344±37.90 414.150±414.11 N/A 0.490±0.00 N/A 1.401±0.81 N/A
ENST00000470255 0.017±0.00 0.195±0.00 N/A 0.230±0.00 0.234±0.00 0.103±0.00 0.052±0.00 0.116±0.00 N/A 0.085±0.00 0.014±0.00 0.054±0.03 N/A 0.126±0.02
ENST00000472436 N/A N/A N/A 0.147±0.00 0.177±0.00 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A
ENST00000476698 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 0.269±0.00 0.755±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014602 ENSMUST00000086819 N/A N/A N/A 58.369±0.00 0.358±0.00 N/A N/A N/A 0.033±0.02 N/A N/A 0.728±0.25 0.354±0.01 2.433±0.00
ENSMUST00000112958 N/A 2.940±0.00 N/A N/A N/A 0.661±0.00 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A
ENSMUST00000171556 0.962±0.73 6.837±2.06 0.585±0.00 12.381±1.22 0.861±0.22 1.598±0.08 0.280±0.01 0.188±0.04 0.039±0.03 0.703±0.16 0.129±0.00 2.242±0.53 0.039±0.01 2.676±1.25
ENSMUST00000171796 N/A 6.217±3.97 N/A 71.335±60.36 N/A 0.719±0.18 0.107±0.00 0.138±0.05 0.023±0.01 N/A 0.159±0.05 0.565±0.28 0.033±0.00 0.841±0.14
ENSMUST00000186828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188136 N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A
ENSMUST00000188493 N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A 0.144±0.00 N/A
ENSMUST00000190249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190723 N/A 2.379±0.17 N/A N/A N/A N/A N/A 0.085±0.01 0.035±0.00 0.122±0.00 N/A N/A N/A N/A
ENSMUST00000190854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026272 ENSMUST00000027491 0.027±0.01 0.110±0.05 N/A 0.005±0.00 0.243±0.04 0.032±0.00 0.046±0.03 0.030±0.01 118.100±109.22 0.056±0.02 N/A 0.277±0.21 N/A 0.037±0.00
ENSMUST00000190603 0.017±0.00 0.122±0.02 N/A 0.009±0.00 N/A N/A 0.055±0.00 0.033±0.00 N/A 0.097±0.00 N/A 0.208±0.07 N/A 0.031±0.00
ENSMUST00000191039 N/A 0.121±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 0.200±0.00 N/A
ENSMUSG00000101378 ENSMUST00000191586 N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.13 N/A N/A 0.327±0.00 N/A 0.255±0.00

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