C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA splicing endonuclease 15 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014980 Tsen15 10090 - 1:152370735-152386688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015124 Tsen15-001 152370735-152386682 protein_coding
  ENSMUST00000159270 Tsen15-005 152371212-152383745 retained_intron
  ENSMUST00000159717 Tsen15-004 152371775-152384092 retained_intron
  ENSMUST00000161717 Tsen15-003 152370838-152372082 retained_intron
  ENSMUST00000162371 Tsen15-002 152371205-152386592 protein_coding
  ENSMUST00000163027 Tsen15-006 152383345-152386688 processed_transcript
  ENSMUST00000188105 Tsen15-007 152384203-152386620 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015124ENSMUST00000159270ENSMUST00000161717ENSMUST00000188105
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015124 6.341±1.72 7.678±1.55 10.401±1.76 7.392±1.79 4.925±0.75 4.210±0.65 7.294±0.59 8.572±1.19 8.248±5.26 5.456±0.74 8.099±0.99 6.607±2.09 12.298±6.49 3.311±0.70
ENSMUST00000159270 N/A N/A N/A 2.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161717 1.467±0.13 N/A N/A N/A 3.962±0.42 N/A 2.295±0.00 2.918±0.56 N/A 3.529±0.18 N/A 5.833±1.53 5.953±4.41 1.209±0.00
ENSMUST00000188105 1.617±0.86 4.069±0.57 1.147±0.17 1.006±0.41 2.116±0.86 1.852±0.40 0.478±0.10 1.040±0.41 0.980±0.53 2.131±0.79 N/A 4.609±1.73 0.413±0.00 0.704±0.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000213 IEA tRNA-intron endonuclease activity
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006388 IEA tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008150 ND biological_process
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069280 tsen15 tRNA splicing endonuclease 15 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000198860 TSEN15 TSEN15 tRNA splicing endonuclease subunit protein_coding Homo_sapiens

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