C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA splicing endonuclease 15 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015124 Tsen15-001 ENSMUSG00000014980 10090 - 1:152370735-152386682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015124 6.341±1.72 7.678±1.55 10.401±1.76 7.392±1.79 4.925±0.75 4.210±0.65 7.294±0.59 8.572±1.19 8.248±5.26 5.456±0.74 8.099±0.99 6.607±2.09 12.298±6.49 3.311±0.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000213 IEA tRNA-intron endonuclease activity
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006388 IEA tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008150 ND biological_process
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361641 TSEN15-001 protein_coding Homo_sapiens 0 640
ENST00000367518 TSEN15-005 retained_intron Homo_sapiens 0 355
ENST00000423085 TSEN15-006 protein_coding Homo_sapiens 0 355
ENST00000423257 TSEN15P1-001 processed_pseudogene Homo_sapiens 0 492
ENST00000457455 TSEN15-004 retained_intron Homo_sapiens 0 276
ENST00000462677 TSEN15-003 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000485209 TSEN15-002 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000533373 TSEN15-007 protein_coding Homo_sapiens 0 407

Loading