C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nipsnap homolog 3A (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015242 Nipsnap3a 10090 + 4:52989272-53001162 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015386 Nipsnap3a-003 52989272-53000847 nonsense_mediated_decay
  ENSMUST00000107666 Nipsnap3a-001 52989418-53001162 protein_coding
  ENSMUST00000123780 Nipsnap3a-002 53000264-53000846 retained_intron
  ENSMUST00000188045 Nipsnap3a-201 52989284-53000854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENSMUST00000015386ENSMUST00000123780ENSMUST00000188045
Transcript ID Heart Testis
ENSMUST00000015386 N/A 57.497±26.95
ENSMUST00000123780 0.231±0.00 N/A
ENSMUST00000188045 N/A 21.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Q CIL_00035Q_0002 CGP 4:52970623-53001162

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020387 nipsnap3 nipsnap homolog 3 (C. elegans) protein_coding Danio_rerio
ENSG00000136783 NIPSNAP3A nipsnap homolog 3A (C. elegans) protein_coding Homo_sapiens

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