C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nipsnap homolog 3A (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136783 NIPSNAP3A 9606 + 9:104747688-104760122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374767 NIPSNAP3A-001 104747688-104760122 protein_coding
  ENST00000471001 NIPSNAP3A-002 104753599-104759130 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374767ENST00000471001
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374767 6.108±0.00 4.724±0.00 0.743±0.00 6.091±1.63 8.576±5.05 4.768±0.29 3.708±1.71 9.583±3.85 4.060±0.35 4.918±2.28 1.240±0.81 7.502±2.20 9.421±3.10 10.180±1.05
ENST00000471001 N/A N/A 1.327±0.00 1.140±0.00 1.311±0.00 N/A N/A N/A N/A 0.705±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Q CIL_00035Q_0001 CGP 9:104694422-104760122

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020387 nipsnap3 nipsnap homolog 3 (C. elegans) protein_coding Danio_rerio
ENSMUSG00000015242 Nipsnap3a nipsnap homolog 3A (C. elegans) protein_coding Mus_musculus
ENSMUSG00000015247 Nipsnap3b nipsnap homolog 3B (C. elegans) protein_coding Mus_musculus

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