C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nipsnap homolog 3B (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015247 Nipsnap3b 10090 + 4:53011880-53022060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015391 Nipsnap3b-001 53011880-53022060 protein_coding
  ENSMUST00000107665 Nipsnap3b-002 53011950-53021576 protein_coding
  ENSMUST00000132678 Nipsnap3b-003 53020976-53021505 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015391ENSMUST00000107665ENSMUST00000132678
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015391 21.296±1.80 73.405±7.58 14.186±2.09 18.051±12.41 15.456±4.53 30.467±2.30 3.445±0.42 15.102±1.78 36.470±24.08 14.868±1.00 0.466±0.19 22.778±8.41 11.651±8.52 3.744±0.50
ENSMUST00000107665 N/A N/A N/A 3.566±0.00 N/A N/A N/A N/A N/A N/A 0.383±0.13 21.225±0.00 19.453±11.54 3.324±0.00
ENSMUST00000132678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.229±0.54 13.338±2.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020387 nipsnap3 nipsnap homolog 3 (C. elegans) protein_coding Danio_rerio
ENSG00000136783 NIPSNAP3A nipsnap homolog 3A (C. elegans) protein_coding Homo_sapiens

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