C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nipsnap homolog 3B (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015391 Nipsnap3b-001 ENSMUSG00000015247 10090 + 4:53011880-53022060 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015391
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015391 21.296±1.80 73.405±7.58 14.186±2.09 18.051±12.41 15.456±4.53 30.467±2.30 3.445±0.42 15.102±1.78 36.470±24.08 14.868±1.00 0.466±0.19 22.778±8.41 11.651±8.52 3.744±0.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374762 NIPSNAP3B-001 protein_coding Homo_sapiens 0 632
ENST00000374767 NIPSNAP3A-001 protein_coding Homo_sapiens 0 732
ENST00000460936 NIPSNAP3B-002 nonsense_mediated_decay Homo_sapiens 0 326

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