C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanosine diphosphate (GDP) dissociation inhibitor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015291 Gdi1 10090 + X:74304998-74311862 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015435 Gdi1-001 74304998-74311862 protein_coding
  ENSMUST00000128915 Gdi1-009 74305828-74307190 processed_transcript
  ENSMUST00000130581 Gdi1-007 74309161-74311156 protein_coding
  ENSMUST00000135041 Gdi1-008 74310381-74311033 processed_transcript
  ENSMUST00000137447 Gdi1-006 74309852-74310936 processed_transcript
  ENSMUST00000144317 Gdi1-005 74307154-74309567 retained_intron
  ENSMUST00000145580 Gdi1-004 74305256-74307012 processed_transcript
  ENSMUST00000146013 Gdi1-002 74305012-74311860 retained_intron
  ENSMUST00000149391 Gdi1-003 74305267-74311858 retained_intron
  ENSMUST00000153141 Gdi1-010 74305313-74307149 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015435ENSMUST00000130581ENSMUST00000135041ENSMUST00000137447ENSMUST00000144317ENSMUST00000146013ENSMUST00000149391
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015435 38.391±8.98 N/A 52.692±8.90 158.441±82.48 33.646±14.80 12.679±2.01 23.069±0.87 35.844±2.03 21.516±6.67 32.278±4.23 8.509±0.82 33.871±10.89 19.708±10.35 2.787±0.40
ENSMUST00000130581 N/A N/A N/A N/A 71.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135041 N/A N/A N/A 316.765±0.00 N/A N/A N/A N/A N/A N/A N/A 133.106±0.00 72.860±7.38 N/A
ENSMUST00000137447 N/A N/A N/A 162.124±0.00 N/A N/A N/A N/A N/A N/A N/A 54.279±0.00 39.626±0.00 1.596±0.00
ENSMUST00000144317 N/A 94.936±10.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146013 9.890±0.00 9.843±0.21 N/A N/A 13.250±2.68 N/A N/A N/A 6.079±0.00 9.869±1.21 1.678±0.34 11.793±0.00 N/A 0.719±0.12
ENSMUST00000149391 44.333±8.50 49.414±5.18 42.633±9.98 78.306±41.41 49.453±7.97 43.415±10.54 12.617±4.16 21.684±6.05 22.173±7.91 46.284±1.46 4.667±1.51 43.924±13.49 16.923±5.13 2.328±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L4 CIL_0001L4_0002 CGP X:74297097-74311862
CIL_0003LB CIL_0003LB_0002 CGP X:74304998-74320149

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005093 ISS Rab GDP-dissociation inhibitor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0017137 IEA Rab GTPase binding
GO:0030496 IEA midbody
GO:0032482 ISS Rab protein signal transduction
GO:0043005 IEA neuron projection
GO:0043234 IEA protein complex
GO:0043547 IEA positive regulation of GTPase activity
GO:0050771 ISS negative regulation of axonogenesis
GO:0050790 ISS regulation of catalytic activity
GO:0051592 IEA response to calcium ion
GO:0090315 ISS negative regulation of protein targeting to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056122 gdi1 GDP dissociation inhibitor 1 protein_coding Danio_rerio
ENSG00000203879 GDI1 GDP dissociation inhibitor 1 protein_coding Homo_sapiens

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