C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003LB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203879-ENSG00000071859 CGP 9606 X:154436920-154450654
GeneTranscriptPositionBiotype
ENSG00000276350 (MIR6858)
microRNA 6858 		ENST00000620733 (MIR6858-201) 154450320-154450386 miRNA
CIL_0003LB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015291-ENSMUSG00000001962 CGP 10090 X:74304998-74320149
GeneTranscriptPositionBiotype
ENSMUSG00000001962 (Fam50a)
family with sequence similarity 50, member A 		ENSMUST00000114160 (Fam50a-001) 74313033-74320149 protein_coding
ENSMUST00000138242 (Fam50a-002) 74313126-74320134 retained_intron
ENSMUST00000149312 (Fam50a-003) 74317468-74317965 retained_intron
ENSMUSG00000015291 (Gdi1)
guanosine diphosphate (GDP) dissociation inhibitor 1 		ENSMUST00000015435 (Gdi1-001) 74304998-74311862 protein_coding
ENSMUST00000128915 (Gdi1-009) 74305828-74307190 processed_transcript
ENSMUST00000130581 (Gdi1-007) 74309161-74311156 protein_coding
ENSMUST00000135041 (Gdi1-008) 74310381-74311033 processed_transcript
ENSMUST00000137447 (Gdi1-006) 74309852-74310936 processed_transcript
ENSMUST00000144317 (Gdi1-005) 74307154-74309567 retained_intron
ENSMUST00000145580 (Gdi1-004) 74305256-74307012 processed_transcript
ENSMUST00000146013 (Gdi1-002) 74305012-74311860 retained_intron
ENSMUST00000149391 (Gdi1-003) 74305267-74311858 retained_intron
ENSMUST00000153141 (Gdi1-010) 74305313-74307149 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LB_0001ENSG00000276350ENST00000620733CIL_0003LB_0002ENSMUSG00000001962ENSMUST00000114160ENSMUST00000138242ENSMUST00000149312ENSMUSG00000015291ENSMUST00000015435ENSMUST00000128915ENSMUST00000130581ENSMUST00000135041ENSMUST00000137447ENSMUST00000144317ENSMUST00000145580ENSMUST00000146013ENSMUST00000149391ENSMUST00000153141
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LB_0001ENSG00000276350ENST00000620733CIL_0003LB_0002ENSMUSG00000001962ENSMUST00000114160ENSMUST00000138242ENSMUSG00000015291ENSMUST00000015435ENSMUST00000130581ENSMUST00000135041ENSMUST00000137447ENSMUST00000144317ENSMUST00000146013ENSMUST00000149391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000276350 ENST00000620733 N/A 3.458±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A N/A N/A N/A 0.641±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001962 ENSMUST00000114160 7.224±2.09 19.819±7.46 20.153±2.66 14.025±1.65 7.082±3.64 8.640±3.89 2.269±0.42 9.238±1.93 10.923±6.82 7.691±1.38 8.872±1.15 19.026±11.51 29.323±6.99 1.326±0.98
ENSMUST00000138242 1.052±0.00 N/A 1.926±0.00 1.535±0.45 1.150±0.17 N/A N/A 0.751±0.08 0.550±0.00 0.812±0.19 0.975±0.14 1.983±0.62 N/A 0.131±0.03
ENSMUST00000149312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000015291 ENSMUST00000015435 38.391±8.98 N/A 52.692±8.90 158.441±82.48 33.646±14.80 12.679±2.01 23.069±0.87 35.844±2.03 21.516±6.67 32.278±4.23 8.509±0.82 33.871±10.89 19.708±10.35 2.787±0.40
ENSMUST00000128915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130581 N/A N/A N/A N/A 71.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135041 N/A N/A N/A 316.765±0.00 N/A N/A N/A N/A N/A N/A N/A 133.106±0.00 72.860±7.38 N/A
ENSMUST00000137447 N/A N/A N/A 162.124±0.00 N/A N/A N/A N/A N/A N/A N/A 54.279±0.00 39.626±0.00 1.596±0.00
ENSMUST00000144317 N/A 94.936±10.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146013 9.890±0.00 9.843±0.21 N/A N/A 13.250±2.68 N/A N/A N/A 6.079±0.00 9.869±1.21 1.678±0.34 11.793±0.00 N/A 0.719±0.12
ENSMUST00000149391 44.333±8.50 49.414±5.18 42.633±9.98 78.306±41.41 49.453±7.97 43.415±10.54 12.617±4.16 21.684±6.05 22.173±7.91 46.284±1.46 4.667±1.51 43.924±13.49 16.923±5.13 2.328±1.35
ENSMUST00000153141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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