C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine active site containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015659 Serac1 10090 - 17:6042196-6079741 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024570 Serac1-002 6044066-6079727 protein_coding
  ENSMUST00000097432 Serac1-001 6042196-6079741 protein_coding
  ENSMUST00000139542 Serac1-004 6064949-6079733 processed_transcript
  ENSMUST00000144284 Serac1-005 6050027-6051388 retained_intron
  ENSMUST00000153325 Serac1-006 6043904-6050055 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097432ENSMUST00000139542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097432 2.504±0.94 1.724±0.51 3.845±0.03 6.282±0.97 2.286±0.37 2.509±0.21 3.579±0.12 0.798±0.23 0.707±0.45 2.376±0.58 2.233±0.81 2.791±0.73 2.728±0.48 4.954±1.10
ENSMUST00000139542 N/A 9.413±0.00 N/A N/A N/A N/A N/A N/A 2.024±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055D CIL_00055D_0002 CGP 17:5841328-6044290
CIL_00055M CIL_00055M_0002 CGP 17:5941280-6079741
CIL_00055L CIL_00055L_0002 CGP 17:6042196-6086517

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006505 IEA GPI anchor metabolic process
GO:0006886 IEA intracellular protein transport
GO:0008654 IEA phospholipid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056121 serac1 serine active site containing 1 protein_coding Danio_rerio
ENSG00000122335 SERAC1 serine active site containing 1 protein_coding Homo_sapiens

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