C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SERTA domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016262 Sertad4 10090 - 1:192844431-192855752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016406 Sertad4-201 192844489-192851747 protein_coding
  ENSMUST00000125391 Sertad4-003 192854202-192855486 processed_transcript
  ENSMUST00000155503 Sertad4-002 192847063-192851747 processed_transcript
  ENSMUST00000155579 Sertad4-001 192844431-192855752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016406ENSMUST00000155579
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016406 0.721±0.00 N/A 3.589±0.70 5.087±3.81 1.524±0.26 N/A 1.583±0.87 0.359±0.02 0.207±0.19 0.216±0.06 0.493±0.24 3.037±1.15 0.420±0.14 0.587±0.36
ENSMUST00000155579 3.225±1.50 3.578±0.93 3.489±0.81 3.860±2.33 1.406±0.43 1.729±0.15 1.946±0.27 1.045±0.28 0.102±0.08 0.812±0.24 0.287±0.08 6.226±3.03 0.854±0.52 0.682±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NP CIL_0008NP_0002 VISTA 1:192484315-193084989
CIL_0009DF CIL_0009DF_0002 VISTA 1:192489593-193091084
CIL_0007QS CIL_0007QS_0002 VISTA 1:192498093-193100700
CIL_0008NN CIL_0008NN_0002 VISTA 1:192506324-193107093
CIL_0008VU CIL_0008VU_0002 VISTA 1:192521976-193125952
CIL_0007SY CIL_0007SY_0002 VISTA 1:192551640-193152457
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_0001G6 CIL_0001G6_0002 CGP 1:192844431-193035698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089795 SERTAD4 SERTA domain containing 4 protein_coding Danio_rerio
ENSG00000082497 SERTAD4 SERTA domain containing 4 protein_coding Homo_sapiens

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