C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SERTA domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016406 Sertad4-201 ENSMUSG00000016262 10090 - 1:192844489-192851747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016406
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016406 0.721±0.00 3.589±0.70 5.087±3.81 1.524±0.26 1.583±0.87 0.359±0.02 0.207±0.19 0.216±0.06 0.493±0.24 3.037±1.15 0.420±0.14 0.587±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NP CIL_0008NP_0002 VISTA 1:192484315-193084989
CIL_0009DF CIL_0009DF_0002 VISTA 1:192489593-193091084
CIL_0007QS CIL_0007QS_0002 VISTA 1:192498093-193100700
CIL_0008NN CIL_0008NN_0002 VISTA 1:192506324-193107093
CIL_0008VU CIL_0008VU_0002 VISTA 1:192521976-193125952
CIL_0007SY CIL_0007SY_0002 VISTA 1:192551640-193152457
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_0001G6 CIL_0001G6_0002 CGP 1:192844431-193035698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367012 SERTAD4-001 protein_coding Homo_sapiens 0 701
ENST00000482421 SERTAD4-004 processed_transcript Homo_sapiens 0 398
ENST00000483884 SERTAD4-002 processed_transcript Homo_sapiens 0 200
ENST00000490620 SERTAD4-003 processed_transcript Homo_sapiens 0 701

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