C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008NP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm617 VISTA 9606 1:210011034-210611642
GeneTranscriptPositionBiotype
ENSG00000054392 (HHAT)
hedgehog acyltransferase 		ENST00000261458 (HHAT-001) 210328953-210676296 protein_coding
ENST00000367009 (HHAT-002) 210439583-210676296 protein_coding
ENST00000367010 (HHAT-004) 210329300-210676296 protein_coding
ENST00000413764 (HHAT-201) 210328252-210676296 protein_coding
ENST00000426968 (HHAT-003) 210362852-210464655 protein_coding
ENST00000537898 (HHAT-202) 210328906-210676296 protein_coding
ENST00000541565 (HHAT-203) 210328252-210676296 protein_coding
ENST00000545154 (HHAT-204) 210328906-210676296 protein_coding
ENST00000545781 (HHAT-205) 210369715-210590542 protein_coding
ENSG00000082497 (SERTAD4)
SERTA domain containing 4 		ENST00000367012 (SERTAD4-001) 210232799-210246255 protein_coding
ENST00000482421 (SERTAD4-004) 210237943-210246628 processed_transcript
ENST00000483884 (SERTAD4-002) 210237978-210246631 processed_transcript
ENST00000490620 (SERTAD4-003) 210237282-210242165 processed_transcript
ENSG00000143469 (SYT14)
synaptotagmin XIV 		ENST00000367015 (SYT14-003) 209952724-210164291 protein_coding
ENST00000367019 (SYT14-004) 209938231-210162223 protein_coding
ENST00000399639 (SYT14-002) 209938260-210171315 nonsense_mediated_decay
ENST00000472886 (SYT14-001) 209938251-210162326 protein_coding
ENST00000534859 (SYT14-005) 210021046-210162967 protein_coding
ENST00000537238 (SYT14-201) 209938174-210164286 protein_coding
ENSG00000200972 (RNU5A-8P)
RNA, U5A small nuclear 8, pseudogene 		ENST00000364102 (RNU5A-8P-201) 210374154-210374267 snRNA
ENSG00000203706 (SERTAD4-AS1)
SERTAD4 antisense RNA 1 		ENST00000437764 (SERTAD4-AS1-001) 210231456-210234044 antisense
ENST00000475406 (SERTAD4-AS1-002) 210231456-210232972 antisense
ENST00000480052 (SERTAD4-AS1-003) 210231456-210234047 antisense
ENSG00000228110 (ST13P19)
suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 19 		ENST00000442505 (ST13P19-001) 210265636-210267241 processed_pseudogene
ENSG00000233455 (RP4-667H12.4)
 ENST00000451327 (RP4-667H12.4-001) 210303684-210304540 processed_pseudogene
ENSG00000270936 (RP5-879K22.1)
 ENST00000605288 (RP5-879K22.1-001) 210462345-210463012 processed_pseudogene
CIL_0008NP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm617 VISTA 10090 1:192484315-193084989
GeneTranscriptPositionBiotype
ENSMUSG00000016200 (Syt14)
synaptotagmin XIV 		ENSMUST00000016344 (Syt14-201) 192897307-193035698 protein_coding
ENSMUSG00000016262 (Sertad4)
SERTA domain containing 4 		ENSMUST00000016406 (Sertad4-201) 192844489-192851747 protein_coding
ENSMUST00000125391 (Sertad4-003) 192854202-192855486 processed_transcript
ENSMUST00000155503 (Sertad4-002) 192847063-192851747 processed_transcript
ENSMUST00000155579 (Sertad4-001) 192844431-192855752 protein_coding
ENSMUSG00000037375 (Hhat)
hedgehog acyltransferase 		ENSMUST00000044190 (Hhat-001) 192512828-192771213 protein_coding
ENSMUST00000123721 (Hhat-003) 192654960-192687706 processed_transcript
ENSMUST00000128619 (Hhat-002) 192543149-192771060 protein_coding
ENSMUST00000154203 (Hhat-004) 192726197-192737279 protein_coding
ENSMUST00000154755 (Hhat-005) 192627447-192726208 protein_coding
ENSMUSG00000047384 (A730013G03Rik)
RIKEN cDNA A730013G03 gene 		ENSMUST00000057543 (A730013G03Rik-201) 192833169-192834719 protein_coding
ENSMUSG00000058248 (Kcnh1)
potassium voltage-gated channel, subfamily H (eag-related), member 1 		ENSMUST00000078470 (Kcnh1-001) 192190784-192510159 protein_coding
ENSMUST00000110844 (Kcnh1-002) 192190784-192510158 protein_coding
ENSMUST00000151152 (Kcnh1-003) 192434740-192505645 processed_transcript
ENSMUSG00000089158 (Gm23583)
predicted gene, 23583 		ENSMUST00000158533 (Gm23583-201) 192998286-192998574 misc_RNA
ENSMUSG00000089812 (Gm15867)
predicted gene 15867 		ENSMUST00000159407 (Gm15867-001) 192854928-192856466 antisense
ENSMUSG00000094131 (Gm22265)
predicted gene, 22265 		ENSMUST00000082947 (Gm22265-201) 192745571-192745686 snRNA
ENSMUSG00000100872 (RP23-381K21.3)
RIKEN cDNA 1700065J18 gene 		ENSMUST00000187875 (RP23-381K21.3-001) 192841705-192842739 lincRNA
ENSMUST00000188648 (RP23-381K21.3-003) 192841671-192842740 lincRNA
ENSMUST00000190576 (RP23-381K21.3-002) 192841664-192842734 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008NP_0001ENSG00000054392ENST00000261458ENST00000367009ENST00000367010ENST00000413764ENST00000537898ENST00000541565ENST00000545154ENST00000545781ENSG00000082497ENST00000367012ENST00000482421ENST00000490620ENSG00000143469ENST00000367015ENST00000367019ENST00000399639ENST00000472886ENST00000534859ENST00000537238ENSG00000200972ENST00000364102ENSG00000203706ENST00000437764ENST00000475406ENSG00000228110ENST00000442505ENSG00000233455ENST00000451327ENSG00000270936ENST00000605288CIL_0008NP_0002ENSMUSG00000016200ENSMUST00000016344ENSMUSG00000016262ENSMUST00000016406ENSMUST00000155579ENSMUSG00000037375ENSMUST00000044190ENSMUST00000123721ENSMUST00000128619ENSMUST00000154203ENSMUST00000154755ENSMUSG00000047384ENSMUST00000057543ENSMUSG00000058248ENSMUST00000078470ENSMUST00000110844ENSMUST00000151152ENSMUSG00000089158ENSMUST00000158533ENSMUSG00000089812ENSMUST00000159407ENSMUSG00000094131ENSMUST00000082947ENSMUSG00000100872ENSMUST00000187875ENSMUST00000188648ENSMUST00000190576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054392 ENST00000261458 0.238±0.00 0.133±0.00 N/A N/A 0.396±0.00 0.343±0.00 N/A N/A 0.556±0.00 N/A N/A 0.942±0.52 0.634±0.19 0.298±0.00
ENST00000367009 N/A N/A N/A N/A 0.663±0.21 N/A 0.165±0.00 0.175±0.00 N/A 0.296±0.00 0.111±0.00 N/A 0.577±0.31 0.200±0.00
ENST00000367010 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.429±0.00 N/A 0.475±0.00 N/A N/A
ENST00000413764 0.251±0.00 N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A 0.293±0.00 0.490±0.00 N/A
ENST00000426968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537898 N/A 0.145±0.00 N/A N/A N/A 0.525±0.00 N/A N/A 0.078±0.00 0.293±0.00 N/A N/A 0.707±0.13 N/A
ENST00000541565 N/A N/A 0.370±0.00 0.406±0.00 N/A N/A 0.074±0.00 N/A 0.306±0.21 N/A N/A 0.489±0.01 N/A 0.748±0.32
ENST00000545154 0.495±0.00 0.229±0.00 N/A 0.355±0.09 0.407±0.00 N/A 0.378±0.00 1.789±0.00 N/A 1.015±0.00 N/A 0.591±0.00 N/A 0.847±0.00
ENST00000545781 N/A N/A N/A N/A 0.365±0.00 0.090±0.00 0.081±0.00 0.020±0.00 N/A 0.381±0.00 0.066±0.00 0.060±0.00 N/A N/A
ENSG00000082497 ENST00000367012 0.811±0.00 0.333±0.00 N/A 1.050±0.23 0.636±0.42 1.182±0.00 0.220±0.00 0.427±0.00 0.315±0.30 0.610±0.15 0.047±0.00 0.821±0.61 1.092±0.28 0.152±0.08
ENST00000482421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.868±0.00 4.366±0.00 N/A
ENST00000483884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490620 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 0.728±0.00 N/A N/A 0.368±0.00 N/A N/A
ENSG00000143469 ENST00000367015 N/A N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367019 N/A N/A N/A 2.557±0.00 0.062±0.00 0.079±0.00 N/A N/A 0.107±0.00 N/A N/A 0.033±0.00 N/A N/A
ENST00000399639 N/A N/A 0.026±0.00 0.214±0.11 0.066±0.00 N/A 0.006±0.00 0.039±0.00 0.010±0.01 0.005±0.00 N/A 0.016±0.00 0.005±0.00 N/A
ENST00000472886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.593±0.00
ENST00000534859 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A 0.362±0.00
ENST00000537238 N/A N/A N/A 0.448±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200972 ENST00000364102 N/A N/A N/A N/A N/A N/A 0.649±0.00 N/A 23.926±0.00 N/A N/A 69.468±0.00 N/A N/A
ENSG00000203706 ENST00000437764 N/A N/A N/A N/A N/A 4.095±0.00 N/A 2.517±0.00 1.457±0.00 2.460±0.00 N/A 2.355±1.98 N/A 0.847±0.24
ENST00000475406 N/A 1.267±0.00 N/A N/A N/A N/A 0.668±0.00 N/A N/A N/A N/A N/A N/A 0.997±0.37
ENST00000480052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228110 ENST00000442505 N/A 0.012±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A 0.012±0.00 0.121±0.00 0.090±0.04 0.045±0.03 N/A
ENSG00000233455 ENST00000451327 N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A 0.046±0.00 N/A N/A N/A 0.047±0.03
ENSG00000270936 ENST00000605288 N/A N/A N/A N/A 0.169±0.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016200 ENSMUST00000016344 0.115±0.06 0.864±0.36 N/A N/A 0.150±0.06 0.055±0.00 0.029±0.01 0.761±0.09 N/A 0.074±0.00 0.029±0.01 0.823±0.40 0.585±0.15 0.407±0.15
ENSMUSG00000016262 ENSMUST00000016406 0.721±0.00 N/A 3.589±0.70 5.087±3.81 1.524±0.26 N/A 1.583±0.87 0.359±0.02 0.207±0.19 0.216±0.06 0.493±0.24 3.037±1.15 0.420±0.14 0.587±0.36
ENSMUST00000125391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155579 3.225±1.50 3.578±0.93 3.489±0.81 3.860±2.33 1.406±0.43 1.729±0.15 1.946±0.27 1.045±0.28 0.102±0.08 0.812±0.24 0.287±0.08 6.226±3.03 0.854±0.52 0.682±0.22
ENSMUSG00000037375 ENSMUST00000044190 1.657±0.55 5.462±0.38 1.187±0.13 0.953±0.07 2.054±0.56 1.452±0.41 0.695±0.12 1.886±0.60 0.334±0.12 0.838±0.17 0.111±0.06 5.072±1.61 0.487±0.30 0.760±0.28
ENSMUST00000123721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.01 N/A N/A N/A
ENSMUST00000128619 0.588±0.12 1.306±0.00 0.521±0.00 0.652±0.00 1.082±0.00 0.841±0.38 0.501±0.05 0.834±0.00 0.385±0.19 0.487±0.00 0.041±0.00 2.338±0.74 0.191±0.00 N/A
ENSMUST00000154203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A
ENSMUST00000154755 N/A N/A 0.238±0.00 0.183±0.04 N/A N/A N/A N/A 0.137±0.00 N/A 0.024±0.02 N/A 0.045±0.00 0.562±0.00
ENSMUSG00000047384 ENSMUST00000057543 0.019±0.00 0.030±0.00 0.011±0.00 0.082±0.02 N/A 0.032±0.00 0.025±0.01 0.019±0.00 0.013±0.01 N/A N/A 0.048±0.01 0.019±0.00 0.079±0.01
ENSMUSG00000058248 ENSMUST00000078470 N/A N/A 0.152±0.00 2.076±1.73 N/A N/A N/A N/A 0.001±0.00 N/A 0.001±0.00 0.202±0.00 0.498±0.00 N/A
ENSMUST00000110844 0.040±0.02 0.063±0.02 0.507±0.13 2.461±2.48 0.455±0.17 0.155±0.03 0.026±0.02 0.241±0.04 0.006±0.00 1.022±0.05 0.011±0.00 0.961±0.31 1.204±1.26 0.097±0.03
ENSMUST00000151152 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000089158 ENSMUST00000158533 N/A N/A 0.135±0.06 0.454±0.00 N/A N/A N/A 0.249±0.00 0.431±0.21 N/A N/A 1.525±0.00 0.152±0.03 0.300±0.00
ENSMUSG00000089812 ENSMUST00000159407 N/A N/A N/A N/A 2.624±0.39 1.686±0.43 N/A N/A 0.078±0.00 0.753±0.00 N/A 5.491±0.00 1.165±0.00 N/A
ENSMUSG00000094131 ENSMUST00000082947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 121.348±102.79 N/A
ENSMUSG00000100872 ENSMUST00000187875 N/A N/A N/A 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A 7.561±1.42
ENSMUST00000188648 N/A N/A 0.089±0.00 0.157±0.11 N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A 0.083±0.06 16.078±0.43
ENSMUST00000190576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.157±0.83

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