C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrilin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016995 Matn4 10090 - 2:164389393-164405160 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103103 Matn4-003 164389393-164404614 protein_coding
  ENSMUST00000103104 Matn4-002 164389393-164405160 protein_coding
  ENSMUST00000109358 Matn4-004 164389393-164404612 protein_coding
  ENSMUST00000109359 Matn4-001 164389393-164404612 protein_coding
  ENSMUST00000154940 Matn4-005 164393918-164404613 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103103ENSMUST00000103104ENSMUST00000109358ENSMUST00000109359ENSMUST00000154940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103103 0.392±0.17 0.299±0.04 1.638±0.17 1.100±0.91 1.906±0.76 2.806±0.27 0.118±0.01 0.692±0.36 0.130±0.08 35.497±0.68 0.539±0.00 0.150±0.00 0.266±0.16 N/A
ENSMUST00000103104 0.212±0.07 0.289±0.16 N/A 0.221±0.00 0.405±0.30 2.287±0.00 0.201±0.09 0.315±0.06 0.265±0.00 N/A 0.317±0.13 0.215±0.10 0.307±0.00 0.096±0.05
ENSMUST00000109358 0.125±0.00 0.453±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.01 N/A 0.329±0.21 0.113±0.02 0.048±0.00 0.091±0.05
ENSMUST00000109359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.450±0.00 0.201±0.05 N/A N/A
ENSMUST00000154940 0.092±0.04 0.134±0.01 0.382±0.00 0.270±0.20 0.393±0.14 0.461±0.00 0.097±0.03 0.175±0.08 0.032±0.02 N/A 0.075±0.03 0.075±0.05 0.037±0.01 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V4 CIL_0003V4_0002 CGP 2:164354070-164405160
CIL_0003L4 CIL_0003L4_0002 CGP 2:164389393-164415448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0048678 IDA response to axon injury

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015947 matn4 matrilin 4 protein_coding Danio_rerio
ENSG00000124159 MATN4 matrilin 4 protein_coding Homo_sapiens

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