C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrilin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124159 MATN4 9606 - 20:45293445-45308529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000353917 MATN4-201 45293767-45308297 protein_coding
  ENST00000360607 MATN4-004 45293450-45308327 protein_coding
  ENST00000372754 MATN4-002 45293445-45305591 protein_coding
  ENST00000372756 MATN4-001 45293445-45305591 protein_coding
  ENST00000537548 MATN4-202 45293767-45308529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000353917ENST00000360607
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000353917 0.022±0.00 N/A 0.094±0.00 0.390±0.00 N/A N/A 0.055±0.00 0.142±0.00 N/A 0.415±0.00 0.494±0.00
ENST00000360607 N/A 0.073±0.00 N/A N/A 0.019±0.00 0.036±0.00 N/A N/A 0.163±0.00 0.330±0.00 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V4 CIL_0003V4_0001 CGP 20:45252239-45308529
CIL_0003L4 CIL_0003L4_0001 CGP 20:45293445-45317824

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0030198 TAS extracellular matrix organization
GO:0048678 IEA response to axon injury

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015947 matn4 matrilin 4 protein_coding Danio_rerio
ENSMUSG00000016995 Matn4 matrilin 4 protein_coding Mus_musculus

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