C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003L4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124159-ENSG00000124232 CGP 9606 20:45293445-45317824
GeneTranscriptPositionBiotype
ENSG00000124159 (MATN4)
matrilin 4 		ENST00000353917 (MATN4-201) 45293767-45308297 protein_coding
ENST00000360607 (MATN4-004) 45293450-45308327 protein_coding
ENST00000372754 (MATN4-002) 45293445-45305591 protein_coding
ENST00000372756 (MATN4-001) 45293445-45305591 protein_coding
ENST00000537548 (MATN4-202) 45293767-45308529 protein_coding
CIL_0003L4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016995-ENSMUSG00000017007 CGP 10090 2:164389393-164415448
GeneTranscriptPositionBiotype
ENSMUSG00000016995 (Matn4)
matrilin 4 		ENSMUST00000103103 (Matn4-003) 164389393-164404614 protein_coding
ENSMUST00000103104 (Matn4-002) 164389393-164405160 protein_coding
ENSMUST00000109358 (Matn4-004) 164389393-164404612 protein_coding
ENSMUST00000109359 (Matn4-001) 164389393-164404612 protein_coding
ENSMUST00000154940 (Matn4-005) 164393918-164404613 retained_intron
ENSMUSG00000017007 (Rbpjl)
recombination signal binding protein for immunoglobulin kappa J region-like 		ENSMUST00000017151 (Rbpjl-001) 164403194-164415448 protein_coding
ENSMUST00000109356 (Rbpjl-003) 164403209-164411338 processed_transcript
ENSMUST00000137427 (Rbpjl-002) 164403141-164414791 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003L4_0001ENSG00000124159ENST00000353917ENST00000360607ENST00000372754ENST00000372756ENST00000537548CIL_0003L4_0002ENSMUSG00000016995ENSMUST00000103103ENSMUST00000103104ENSMUST00000109358ENSMUST00000109359ENSMUST00000154940ENSMUSG00000017007ENSMUST00000017151ENSMUST00000109356ENSMUST00000137427
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003L4_0001ENSG00000124159ENST00000353917ENST00000360607CIL_0003L4_0002ENSMUSG00000016995ENSMUST00000103103ENSMUST00000103104ENSMUST00000109358ENSMUST00000109359ENSMUST00000154940ENSMUSG00000017007ENSMUST00000017151ENSMUST00000109356ENSMUST00000137427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124159 ENST00000353917 0.022±0.00 N/A N/A 0.094±0.00 0.390±0.00 N/A N/A 0.055±0.00 0.142±0.00 N/A N/A 0.415±0.00 N/A 0.494±0.00
ENST00000360607 N/A 0.073±0.00 N/A N/A N/A 0.019±0.00 0.036±0.00 N/A N/A 0.163±0.00 N/A 0.330±0.00 N/A 0.244±0.00
ENST00000372754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016995 ENSMUST00000103103 0.392±0.17 0.299±0.04 1.638±0.17 1.100±0.91 1.906±0.76 2.806±0.27 0.118±0.01 0.692±0.36 0.130±0.08 35.497±0.68 0.539±0.00 0.150±0.00 0.266±0.16 N/A
ENSMUST00000103104 0.212±0.07 0.289±0.16 N/A 0.221±0.00 0.405±0.30 2.287±0.00 0.201±0.09 0.315±0.06 0.265±0.00 N/A 0.317±0.13 0.215±0.10 0.307±0.00 0.096±0.05
ENSMUST00000109358 0.125±0.00 0.453±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.01 N/A 0.329±0.21 0.113±0.02 0.048±0.00 0.091±0.05
ENSMUST00000109359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.450±0.00 0.201±0.05 N/A N/A
ENSMUST00000154940 0.092±0.04 0.134±0.01 0.382±0.00 0.270±0.20 0.393±0.14 0.461±0.00 0.097±0.03 0.175±0.08 0.032±0.02 N/A 0.075±0.03 0.075±0.05 0.037±0.01 0.013±0.00
ENSMUSG00000017007 ENSMUST00000017151 N/A N/A N/A N/A N/A 5.810±0.34 N/A N/A 0.034±0.02 20.705±2.35 0.067±0.00 0.050±0.03 N/A 0.021±0.00
ENSMUST00000109356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A
ENSMUST00000137427 N/A 0.087±0.00 N/A N/A 0.164±0.11 1.125±0.59 0.026±0.00 0.054±0.00 0.022±0.01 9.804±3.48 0.020±0.00 0.019±0.00 0.021±0.00 0.031±0.01

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