C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: troponin C2, fast
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017300 Tnnc2 10090 - 2:164777161-164779967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103095 Tnnc2-001 164777161-164779741 protein_coding
  ENSMUST00000155443 Tnnc2-002 164777944-164779967 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLungMuscleTestisENSMUST00000103095ENSMUST00000155443
Transcript ID Bladder Brain Breast Kidney Lung Muscle Testis
ENSMUST00000103095 10.628±1.95 0.499±0.00 905.264±262.37 80.827±1.35 168.449±2.22 12120.480±1145.65 4.839±0.00
ENSMUST00000155443 N/A N/A 393.725±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002L CIL_00002L_0002 CGP 2:164745983-164778822
CIL_00002K CIL_00002K_0002 CGP 2:164769898-164779967
CIL_0000IO CIL_0000IO_0002 CGP 2:164777161-164793816

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 IEA skeletal muscle contraction
GO:0003779 IEA actin binding
GO:0005509 IEA calcium ion binding
GO:0005861 IEA troponin complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070835 tnnc2 troponin C type 2 (fast) protein_coding Danio_rerio
ENSDARG00000095002 TNNC2 (2 of 2) troponin C type 2 (fast) protein_coding Danio_rerio
ENSG00000101470 TNNC2 troponin C type 2 (fast) protein_coding Homo_sapiens

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