C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhomboid, veinlet-like 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017692 Rhbdl3 10090 + 11:80300912-80355955 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017836 Rhbdl3-001 80300912-80355955 protein_coding
  ENSMUST00000138846 Rhbdl3-003 80319690-80324158 retained_intron
  ENSMUST00000157016 Rhbdl3-002 80346403-80353682 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017836ENSMUST00000157016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017836 3.849±0.54 0.891±0.22 0.641±0.10 6.789±1.43 1.773±0.64 2.589±0.34 3.064±0.25 0.719±0.29 0.042±0.03 1.136±0.43 3.132±0.81 2.257±0.87 0.217±0.19 0.159±0.02
ENSMUST00000157016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VO CIL_0000VO_0002 CGP 11:80209019-80355955
CIL_0000VP CIL_0000VP_0002 CGP 11:80300912-80378034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070311 rhbdl3 rhomboid, veinlet-like 3 (Drosophila) protein_coding Danio_rerio
ENSG00000141314 RHBDL3 rhomboid, veinlet-like 3 (Drosophila) protein_coding Homo_sapiens

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