C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126858-ENSG00000141314 CGP 9606 17:32142454-32324661
GeneTranscriptPositionBiotype
ENSG00000108666 (C17orf75)
chromosome 17 open reading frame 75 		ENST00000225805 (C17orf75-201) 32328443-32342209 protein_coding
ENST00000577809 (C17orf75-001) 32331362-32342189 protein_coding
ENST00000578215 (C17orf75-010) 32334651-32337941 retained_intron
ENST00000580294 (C17orf75-006) 32340869-32342167 retained_intron
ENST00000580485 (C17orf75-005) 32338019-32342170 retained_intron
ENST00000580558 (C17orf75-007) 32333458-32341952 protein_coding
ENST00000581747 (C17orf75-009) 32334538-32341871 protein_coding
ENST00000582073 (C17orf75-003) 32338007-32342269 retained_intron
ENST00000582961 (C17orf75-012) 32331596-32334543 protein_coding
ENST00000583104 (C17orf75-011) 32324565-32335362 protein_coding
ENST00000583221 (C17orf75-004) 32334789-32342209 nonsense_mediated_decay
ENST00000583334 (C17orf75-008) 32335342-32341901 protein_coding
ENST00000583774 (C17orf75-002) 32334491-32350023 protein_coding
ENSG00000126858 (RHOT1)
ras homolog family member T1 		ENST00000333942 (RHOT1-001) 32142454-32225770 protein_coding
ENST00000354266 (RHOT1-004) 32142560-32225666 protein_coding
ENST00000358365 (RHOT1-002) 32142466-32225727 protein_coding
ENST00000394692 (RHOT1-008) 32142680-32225727 protein_coding
ENST00000545287 (RHOT1-015) 32142537-32225113 protein_coding
ENST00000578205 (RHOT1-007) 32142673-32225503 nonsense_mediated_decay
ENST00000580392 (RHOT1-012) 32203937-32253374 protein_coding
ENST00000580976 (RHOT1-010) 32142677-32199504 processed_transcript
ENST00000581031 (RHOT1-005) 32142568-32225503 nonsense_mediated_decay
ENST00000581094 (RHOT1-006) 32142630-32209738 protein_coding
ENST00000581148 (RHOT1-013) 32206925-32211435 protein_coding
ENST00000581567 (RHOT1-011) 32203860-32207541 retained_intron
ENST00000582586 (RHOT1-016) 32209388-32242162 processed_transcript
ENST00000582602 (RHOT1-018) 32202824-32211195 protein_coding
ENST00000583994 (RHOT1-003) 32142475-32225727 nonsense_mediated_decay
ENST00000584692 (RHOT1-014) 32206950-32224960 nonsense_mediated_decay
ENST00000584852 (RHOT1-017) 32208302-32253374 protein_coding
ENSG00000141314 (RHBDL3)
rhomboid, veinlet-like 3 (Drosophila) 		ENST00000269051 (RHBDL3-001) 32266176-32324661 protein_coding
ENST00000431505 (RHBDL3-002) 32266176-32321363 protein_coding
ENST00000536287 (RHBDL3-005) 32267804-32324656 protein_coding
ENST00000538145 (RHBDL3-004) 32266177-32321363 protein_coding
ENST00000578006 (RHBDL3-003) 32266176-32321362 nonsense_mediated_decay
ENST00000582967 (RHBDL3-006) 32284152-32316274 retained_intron
ENSG00000263674 (RP11-443G13.2)
 ENST00000584815 (RP11-443G13.2-001) 32280387-32280953 antisense
ENSG00000265293 (ARGFXP2)
arginine-fifty homeobox pseudogene 2 		ENST00000579304 (ARGFXP2-001) 32150433-32151504 processed_pseudogene
ENSG00000266282 (UBL5P2)
ubiquitin-like 5 pseudogene 2 		ENST00000583788 (UBL5P2-001) 32227890-32228108 processed_pseudogene
ENSG00000280020 (CTD-2095E4.4)
 ENST00000623905 (CTD-2095E4.4-001) 32178946-32180074 TEC
ENST00000624498 (CTD-2095E4.4-201) 32179360-32179866 TEC
ENSG00000280033 (CTD-2095E4.3)
 ENST00000623319 (CTD-2095E4.3-001) 32159311-32160371 TEC
CIL_0000VO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017686-ENSMUSG00000017692 CGP 10090 11:80209019-80355955
GeneTranscriptPositionBiotype
ENSMUSG00000017686 (Rhot1)
ras homolog gene family, member T1 		ENSMUST00000017831 (Rhot1-002) 80209119-80266767 protein_coding
ENSMUST00000055056 (Rhot1-201) 80209055-80267907 protein_coding
ENSMUST00000077451 (Rhot1-001) 80209019-80266812 protein_coding
ENSMUST00000092857 (Rhot1-004) 80209084-80267486 protein_coding
ENSMUST00000134148 (Rhot1-007) 80209147-80246403 retained_intron
ENSMUST00000134894 (Rhot1-003) 80242611-80266744 protein_coding
ENSMUST00000135947 (Rhot1-005) 80249674-80266738 processed_transcript
ENSMUST00000151518 (Rhot1-008) 80252497-80254828 retained_intron
ENSMUST00000154362 (Rhot1-006) 80209113-80252037 retained_intron
ENSMUSG00000017692 (Rhbdl3)
rhomboid, veinlet-like 3 (Drosophila) 		ENSMUST00000017836 (Rhbdl3-001) 80300912-80355955 protein_coding
ENSMUST00000138846 (Rhbdl3-003) 80319690-80324158 retained_intron
ENSMUST00000157016 (Rhbdl3-002) 80346403-80353682 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VO_0001ENSG00000108666ENST00000225805ENST00000577809ENSG00000126858ENST00000333942ENST00000354266ENST00000358365ENST00000394692ENST00000545287ENST00000578205ENST00000581031ENST00000581094ENST00000583994ENSG00000141314ENST00000269051ENSG00000263674ENST00000584815ENSG00000265293ENST00000579304ENSG00000266282ENST00000583788ENSG00000280020ENST00000623905ENST00000624498ENSG00000280033ENST00000623319CIL_0000VO_0002ENSMUSG00000017686ENSMUST00000017831ENSMUST00000055056ENSMUST00000077451ENSMUST00000092857ENSMUST00000134148ENSMUST00000134894ENSMUST00000135947ENSMUSG00000017692ENSMUST00000017836ENSMUST00000157016
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108666 ENST00000225805 N/A N/A N/A 3.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.248±0.00 N/A 22.550±0.00
ENST00000578215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000126858 ENST00000333942 2.682±0.00 N/A N/A 4.145±0.00 1.732±0.34 2.558±0.21 1.444±0.00 N/A N/A 2.305±0.00 N/A 3.771±0.79 2.824±0.18 2.069±0.00
ENST00000354266 N/A 0.959±0.00 N/A 3.048±0.95 2.459±0.00 4.183±0.00 5.811±0.00 3.923±0.00 1.134±0.00 2.587±0.00 2.432±0.00 2.519±0.05 N/A 2.843±0.89
ENST00000358365 N/A 1.846±0.00 N/A 4.741±0.00 1.815±0.00 2.986±0.00 3.220±0.00 2.391±0.00 1.553±0.00 1.300±0.00 N/A 1.992±0.15 0.813±0.00 4.011±0.00
ENST00000394692 N/A N/A 1.155±0.00 2.612±0.00 0.996±0.00 1.285±0.00 N/A 1.485±0.00 0.718±0.00 1.478±0.07 0.989±0.00 2.421±0.00 1.415±0.50 2.261±0.00
ENST00000545287 N/A N/A 2.556±0.00 2.212±0.00 1.776±0.00 1.826±0.00 3.411±0.00 N/A 6.658±0.00 2.661±0.00 N/A 2.613±0.53 2.200±0.00 2.297±0.00
ENST00000578205 1.666±0.00 1.044±0.00 N/A 3.341±0.00 1.507±0.11 1.679±0.00 N/A N/A 1.834±0.00 1.802±0.00 N/A 2.975±0.00 N/A N/A
ENST00000580392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581031 2.457±0.00 1.498±0.00 N/A N/A N/A 1.945±0.00 2.934±0.00 1.456±0.00 N/A N/A 0.846±0.00 1.835±0.00 0.796±0.00 N/A
ENST00000581094 N/A N/A N/A N/A 0.880±0.00 N/A N/A N/A 1.448±0.00 2.066±0.00 N/A N/A N/A N/A
ENST00000581148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583994 N/A N/A N/A N/A N/A 1.465±0.00 N/A N/A N/A N/A N/A N/A 0.737±0.00 N/A
ENST00000584692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141314 ENST00000269051 N/A N/A N/A 7.271±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263674 ENST00000584815 N/A N/A N/A 0.175±0.00 N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A 0.406±0.15
ENSG00000265293 ENST00000579304 0.029±0.00 0.368±0.00 0.063±0.00 0.189±0.12 0.475±0.10 0.202±0.13 0.126±0.04 0.152±0.09 0.186±0.11 0.227±0.00 0.039±0.00 0.870±0.51 0.160±0.12 0.379±0.30
ENSG00000266282 ENST00000583788 N/A N/A N/A 0.894±0.00 N/A 0.074±0.00 0.072±0.00 0.079±0.00 N/A N/A 0.070±0.00 N/A N/A 0.072±0.00
ENSG00000280020 ENST00000623905 0.995±0.00 2.295±0.00 N/A 0.323±0.28 0.253±0.19 0.305±0.00 0.191±0.04 0.674±0.00 0.076±0.00 0.411±0.00 0.523±0.22 0.317±0.07 0.207±0.00 0.677±0.40
ENST00000624498 0.291±0.00 N/A 0.549±0.00 N/A 1.498±0.00 0.766±0.00 0.166±0.00 N/A 0.694±0.00 0.224±0.00 N/A 0.539±0.45 0.258±0.00 0.337±0.00
ENSG00000280033 ENST00000623319 0.313±0.00 0.488±0.00 0.240±0.00 0.126±0.08 0.563±0.34 0.523±0.08 0.323±0.04 0.098±0.03 0.171±0.10 0.133±0.10 0.855±0.66 0.478±0.08 0.099±0.04 0.250±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017686 ENSMUST00000017831 2.147±0.37 N/A 5.670±0.26 4.563±0.28 2.391±0.44 1.256±0.61 N/A 2.840±0.66 3.205±1.56 2.105±0.45 3.776±0.81 8.410±1.02 5.770±2.37 4.261±0.00
ENSMUST00000055056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.884±0.00 N/A N/A
ENSMUST00000077451 2.216±0.22 1.722±0.00 N/A N/A 1.713±0.00 0.775±0.11 N/A N/A 0.917±0.04 1.240±0.12 1.481±0.00 1.632±0.59 2.090±0.64 8.016±3.97
ENSMUST00000092857 4.173±0.15 4.796±1.04 4.365±0.86 5.514±2.72 3.524±0.83 3.206±0.70 2.994±0.41 5.161±0.49 3.363±0.66 4.396±0.50 2.708±0.53 4.002±1.11 3.427±2.39 N/A
ENSMUST00000134148 N/A N/A N/A 4.681±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.584±0.39 3.378±0.00
ENSMUST00000134894 7.223±0.48 4.247±1.17 8.971±0.03 5.039±1.40 5.594±1.36 1.655±0.14 7.749±1.39 3.021±0.39 2.887±0.41 4.433±0.86 3.834±0.60 3.841±0.83 3.544±1.47 8.427±3.33
ENSMUST00000135947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.809±1.19 N/A N/A
ENSMUST00000151518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017692 ENSMUST00000017836 3.849±0.54 0.891±0.22 0.641±0.10 6.789±1.43 1.773±0.64 2.589±0.34 3.064±0.25 0.719±0.29 0.042±0.03 1.136±0.43 3.132±0.81 2.257±0.87 0.217±0.19 0.159±0.02
ENSMUST00000138846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A

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