C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine incorporator 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017707 Serinc3 10090 - 2:163623272-163645131 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017851 Serinc3-001 163623272-163645131 protein_coding
  ENSMUST00000129854 Serinc3-002 163636831-163645125 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017851ENSMUST00000129854
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017851 83.388±20.77 442.464±51.95 96.777±69.15 15.301±3.65 193.372±91.94 170.770±66.83 48.187±12.74 89.005±26.83 145.299±98.81 217.879±102.95 35.350±20.16 333.055±110.93 43.354±20.66 72.144±49.81
ENSMUST00000129854 N/A N/A N/A 38.983±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 57.093±13.05 28.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0002 VISTA 2:163385776-163987192
CIL_0002SO CIL_0002SO_0002 CGP 2:163602314-163645131
CIL_0003UY CIL_0003UY_0002 CGP 2:163623272-163726158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006658 IEA phosphatidylserine metabolic process
GO:0006665 IEA sphingolipid metabolic process
GO:0015194 IEA L-serine transmembrane transporter activity
GO:0015825 IEA L-serine transport
GO:0016021 IEA integral component of membrane
GO:1902237 IDA positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086133 SERINC3 serine incorporator 3 protein_coding Danio_rerio
ENSG00000132824 SERINC3 serine incorporator 3 protein_coding Homo_sapiens

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