C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002SO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124120-ENSG00000132824 CGP 9606 20:44475886-44522109
GeneTranscriptPositionBiotype
ENSG00000124120 (TTPAL)
tocopherol (alpha) transfer protein-like
ENST00000262605 (TTPAL-002) 44475886-44494603 protein_coding
ENST00000372904 (TTPAL-001) 44475888-44494603 protein_coding
ENST00000372906 (TTPAL-005) 44475904-44489836 protein_coding
ENST00000456317 (TTPAL-004) 44475920-44489453 protein_coding
ENST00000461134 (TTPAL-003) 44485805-44491815 retained_intron
ENSG00000132824 (SERINC3)
serine incorporator 3
ENST00000255175 (SERINC3-201) 44496224-44522085 protein_coding
ENST00000342374 (SERINC3-001) 44497431-44522109 protein_coding
ENST00000411544 (SERINC3-002) 44496221-44504891 protein_coding
ENST00000468234 (SERINC3-003) 44513893-44522054 processed_transcript
CIL_0002SO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017679-ENSMUSG00000017707 CGP 10090 2:163602314-163645131
GeneTranscriptPositionBiotype
ENSMUSG00000017679 (Ttpal)
tocopherol (alpha) transfer protein-like
ENSMUST00000109405 (Ttpal-001) 163602351-163619013 nonsense_mediated_decay
ENSMUST00000109408 (Ttpal-002) 163602322-163616500 protein_coding
ENSMUST00000132904 (Ttpal-006) 163611520-163615426 retained_intron
ENSMUST00000144729 (Ttpal-003) 163602349-163612853 retained_intron
ENSMUST00000152135 (Ttpal-005) 163602349-163607291 protein_coding
ENSMUST00000156839 (Ttpal-004) 163602563-163611897 protein_coding
ENSMUST00000171696 (Ttpal-201) 163602314-163619012 protein_coding
ENSMUSG00000017707 (Serinc3)
serine incorporator 3
ENSMUST00000017851 (Serinc3-001) 163623272-163645131 protein_coding
ENSMUST00000129854 (Serinc3-002) 163636831-163645125 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SO_0001ENSG00000124120ENST00000262605ENST00000372904ENST00000372906ENST00000456317ENST00000461134ENSG00000132824ENST00000255175ENST00000342374ENST00000411544ENST00000468234CIL_0002SO_0002ENSMUSG00000017679ENSMUST00000109405ENSMUST00000109408ENSMUST00000132904ENSMUST00000144729ENSMUST00000152135ENSMUST00000156839ENSMUST00000171696ENSMUSG00000017707ENSMUST00000017851ENSMUST00000129854
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SO_0001ENSG00000124120ENST00000262605ENST00000372904ENST00000461134ENSG00000132824ENST00000255175ENST00000342374ENST00000411544CIL_0002SO_0002ENSMUSG00000017679ENSMUST00000109405ENSMUST00000109408ENSMUST00000156839ENSMUST00000171696ENSMUSG00000017707ENSMUST00000017851ENSMUST00000129854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124120 ENST00000262605 N/A N/A N/A N/A 0.488±0.00 0.521±0.00 0.414±0.37 0.976±0.00 3.806±0.00 N/A 0.539±0.00 1.709±0.43 0.524±0.03 1.296±0.00
ENST00000372904 N/A 0.612±0.00 N/A 0.875±0.00 N/A 0.125±0.00 N/A N/A 1.041±0.00 N/A N/A 1.265±1.00 N/A N/A
ENST00000372906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461134 N/A N/A N/A 0.370±0.00 N/A 0.296±0.00 N/A 2.237±0.00 0.313±0.00 N/A N/A N/A N/A N/A
ENSG00000132824 ENST00000255175 N/A N/A 2.153±0.00 N/A N/A 4.380±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000342374 50.625±0.00 23.459±0.00 5.499±0.00 33.824±10.01 28.244±14.67 36.359±0.00 15.653±8.01 18.629±6.36 17.844±0.16 27.080±8.42 21.992±17.15 25.521±11.91 56.642±19.04 48.039±1.17
ENST00000411544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 82.625±0.00
ENST00000468234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017679 ENSMUST00000109405 N/A N/A 2.923±0.37 2.544±0.25 N/A N/A N/A N/A 1.097±0.19 N/A 0.625±0.00 N/A 1.849±0.63 0.256±0.02
ENSMUST00000109408 2.037±0.36 7.692±1.31 N/A 2.661±0.00 7.935±2.89 4.420±0.52 1.602±0.03 1.343±0.09 1.219±0.35 4.383±1.48 N/A 6.052±1.92 3.850±1.15 N/A
ENSMUST00000132904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156839 N/A 6.619±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171696 4.121±1.29 3.807±0.35 4.612±1.10 6.760±0.50 4.555±2.07 2.878±1.07 2.117±0.11 2.323±0.46 1.763±0.70 5.540±0.40 0.732±0.25 3.680±1.68 3.936±0.87 0.455±0.15
ENSMUSG00000017707 ENSMUST00000017851 83.388±20.77 442.464±51.95 96.777±69.15 15.301±3.65 193.372±91.94 170.770±66.83 48.187±12.74 89.005±26.83 145.299±98.81 217.879±102.95 35.350±20.16 333.055±110.93 43.354±20.66 72.144±49.81
ENSMUST00000129854 N/A N/A N/A 38.983±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 57.093±13.05 28.189±0.00

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