C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol transfer protein, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017781 Pitpna 10090 + 11:75588097-75628804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102509 Pitpna-002 75588159-75626433 nonsense_mediated_decay
  ENSMUST00000140841 Pitpna-003 75588159-75598548 retained_intron
  ENSMUST00000143219 Pitpna-001 75588097-75628804 protein_coding
  ENSMUST00000153768 Pitpna-004 75620671-75626306 processed_transcript
  ENSMUST00000179445 Pitpna-201 75588119-75626730 protein_coding
  ENSMUST00000179521 Pitpna-202 75588108-75628778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102509ENSMUST00000143219ENSMUST00000179445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102509 N/A N/A N/A 180.026±0.00 N/A N/A N/A N/A N/A N/A N/A 101.084±0.00 58.992±44.66 41.409±0.00
ENSMUST00000143219 11.420±5.24 14.573±2.97 32.921±1.79 21.491±1.95 9.365±3.28 11.178±2.64 4.325±1.83 7.786±2.88 5.263±1.62 17.574±0.45 15.501±2.43 10.476±4.81 8.677±1.36 3.250±1.28
ENSMUST00000179445 23.368±5.49 23.701±7.17 49.574±6.17 36.391±2.31 34.841±7.91 35.200±9.70 20.830±0.76 24.002±2.55 17.393±5.84 30.652±3.02 29.426±3.99 28.710±10.86 31.588±13.11 18.156±7.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H7 CIL_0006H7_0002 CGP 11:75531694-75628804

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005543 ISO phospholipid binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0006810 IEA transport
GO:0008289 ISS lipid binding
GO:0016021 ISS integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039490 pitpnaa phosphatidylinositol transfer protein, alpha a protein_coding Danio_rerio
ENSDARG00000044091 pitpnab phosphatidylinositol transfer protein, alpha b protein_coding Danio_rerio
ENSG00000174238 PITPNA phosphatidylinositol transfer protein, alpha protein_coding Homo_sapiens

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