C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol transfer protein, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174238 PITPNA 9606 - 17:1517718-1562816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313486 PITPNA-001 1517718-1562816 protein_coding
  ENST00000539476 PITPNA-201 1517993-1562791 protein_coding
  ENST00000572004 PITPNA-002 1538439-1541599 retained_intron
  ENST00000573056 PITPNA-004 1543020-1559801 protein_coding
  ENST00000573231 PITPNA-006 1541587-1562630 protein_coding
  ENST00000574991 PITPNA-003 1534169-1553072 protein_coding
  ENST00000575288 PITPNA-010 1520213-1562746 nonsense_mediated_decay
  ENST00000575895 PITPNA-005 1535262-1559801 protein_coding
  ENST00000576010 PITPNA-009 1535507-1562780 protein_coding
  ENST00000576722 PITPNA-008 1535182-1562739 protein_coding
  ENST00000576761 PITPNA-007 1535471-1562768 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313486ENST00000539476ENST00000574991ENST00000575288ENST00000575895
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313486 4.580±0.00 N/A 4.858±1.66 8.629±0.00 8.083±4.42 3.035±2.34 9.831±0.00 3.946±0.75 2.363±0.79 2.655±2.30 5.584±4.95 5.063±0.25 23.406±0.00
ENST00000539476 6.711±0.00 7.449±0.00 25.169±0.00 N/A N/A 5.323±0.00 7.142±5.65 4.423±0.00 12.554±0.00 N/A 11.908±0.00 N/A N/A
ENST00000574991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.367±0.00 28.759±0.00 42.296±0.00
ENST00000575288 11.300±0.00 10.489±0.00 20.496±0.00 11.352±0.00 9.162±6.38 6.206±0.00 N/A 4.793±0.00 18.260±0.00 4.015±0.00 9.544±7.21 31.485±0.00 28.661±9.37
ENST00000575895 N/A N/A N/A N/A N/A 1.335±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AE CIL_0006AE_0002 CGP 17:1494571-1562816
CIL_00060R CIL_00060R_0002 CGP 17:1517718-1628886

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0006629 NAS lipid metabolic process
GO:0006810 IEA transport
GO:0007411 TAS axon guidance
GO:0007601 TAS visual perception
GO:0008289 IEA lipid binding
GO:0008525 TAS phosphatidylcholine transporter activity
GO:0008526 TAS phosphatidylinositol transporter activity
GO:0015914 TAS phospholipid transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039490 pitpnaa phosphatidylinositol transfer protein, alpha a protein_coding Danio_rerio
ENSDARG00000044091 pitpnab phosphatidylinositol transfer protein, alpha b protein_coding Danio_rerio
ENSMUSG00000017781 Pitpna phosphatidylinositol transfer protein, alpha protein_coding Mus_musculus

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