C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102509 Pitpna-002 ENSMUSG00000017781 10090 + 11:75588159-75626433 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000102509
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000102509 180.026±0.00 101.084±0.00 58.992±44.66 41.409±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H7 CIL_0006H7_0002 CGP 11:75531694-75628804

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005543 ISO phospholipid binding
GO:0005622 IEA intracellular
GO:0006810 IEA transport
GO:0008289 ISS lipid binding
GO:0016021 ISS integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002974 pitpnab-201 protein_coding Danio_rerio 0 255
ENSDART00000149362 pitpnab-001 protein_coding Danio_rerio 0 255
ENST00000313486 PITPNA-001 protein_coding Homo_sapiens 0 926
ENST00000539476 PITPNA-201 protein_coding Homo_sapiens 0 926
ENST00000573056 PITPNA-004 protein_coding Homo_sapiens 0 405
ENST00000573231 PITPNA-006 protein_coding Homo_sapiens 0 407
ENST00000574991 PITPNA-003 protein_coding Homo_sapiens 0 355
ENST00000575288 PITPNA-010 nonsense_mediated_decay Homo_sapiens 0 1585
ENST00000575895 PITPNA-005 protein_coding Homo_sapiens 0 405
ENST00000576010 PITPNA-009 protein_coding Homo_sapiens 0 405
ENST00000576722 PITPNA-008 protein_coding Homo_sapiens 0 372
ENST00000576761 PITPNA-007 protein_coding Homo_sapiens 0 405

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