C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2bc
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018102 Hist1h2bc 10090 + 13:23684199-23692488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018246 Hist1h2bc-001 23684199-23692488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018246
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018246 130.941±44.91 180.444±24.68 146.999±8.23 32.811±14.15 91.551±37.19 214.490±15.02 71.645±12.10 289.894±17.52 141.409±64.67 66.190±13.03 49.300±3.21 108.982±28.41 305.803±391.57 10.426±3.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_000A CGP 13:23683449-23692488
CIL_0000LM CIL_0000LM_0003 CGP 13:23684199-23696542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0002227 IEA innate immune response in mucosa
GO:0003677 IEA DNA binding
GO:0005615 IEA extracellular space
GO:0005654 TAS nucleoplasm
GO:0019731 IEA antibacterial humoral response
GO:0046982 IEA protein heterodimerization activity
GO:0050830 IEA defense response to Gram-positive bacterium
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034203 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051726 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051778 zgc:194989 zgc:194989 protein_coding Danio_rerio
ENSDARG00000068996 hist2h2l histone 2, H2, like protein_coding Danio_rerio
ENSDARG00000070289 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000076129 CABZ01086354.1 Histone H2B protein_coding Danio_rerio
ENSDARG00000078724 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000078941 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000086591 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000087854 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000088028 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000092743 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000093195 si:dkey-261m9.6 si:dkey-261m9.6 protein_coding Danio_rerio
ENSDARG00000093756 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094610 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094744 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSG00000274290 HIST1H2BE histone cluster 1, H2be protein_coding Homo_sapiens

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