C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET and MYND domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044530 Smyd4-001 ENSMUSG00000018809 10090 + 11:75348433-75405705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044530
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044530 1.982±0.58 1.601±0.97 3.716±0.72 2.354±1.01 1.234±0.55 1.219±0.20 0.850±0.41 3.387±0.22 1.010±0.43 1.877±0.27 1.236±0.17 2.562±1.11 1.584±0.59 0.581±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305513 SMYD4-001 protein_coding Homo_sapiens 0 1709
ENST00000570368 SMYD4-005 protein_coding Homo_sapiens 0 556
ENST00000571854 SMYD4-003 protein_coding Homo_sapiens 0 505
ENST00000573937 SMYD4-007 retained_intron Homo_sapiens 0 390

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