C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, FYVE domain containing 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099443 Zfyve27-003 ENSMUSG00000018820 10090 + 19:42170594-42191717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099443
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099443 10.874±2.99 8.768±1.38 9.993±1.47 10.296±3.94 9.171±0.56 8.408±0.88 5.037±0.20 7.403±0.71 4.562±0.85 9.557±0.90 3.960±0.49 8.071±1.06 8.925±3.02 11.156±4.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VD CIL_0004VD_0002 CGP 19:42147400-42194590
CIL_0004V8 CIL_0004V8_0002 CGP 19:42163951-42202252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0031175 ISS neuron projection development
GO:0032584 IDA growth cone membrane
GO:0046872 IEA metal ion binding
GO:0048011 ISS neurotrophin TRK receptor signaling pathway
GO:0055038 ISS recycling endosome membrane
GO:0072659 ISS protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337540 ZFYVE27-201 protein_coding Homo_sapiens 0 948
ENST00000357540 ZFYVE27-202 protein_coding Homo_sapiens 0 809
ENST00000359980 ZFYVE27-006 protein_coding Homo_sapiens 0 1260
ENST00000370610 ZFYVE27-203 protein_coding Homo_sapiens 0 881
ENST00000370613 ZFYVE27-204 protein_coding Homo_sapiens 0 721
ENST00000393677 ZFYVE27-003 protein_coding Homo_sapiens 0 1162
ENST00000423811 ZFYVE27-005 protein_coding Homo_sapiens 0 1048
ENST00000462887 ZFYVE27-007 processed_transcript Homo_sapiens 0 202

Loading