C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secernin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019124 Scrn1 10090 - 6:54505890-54566489 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019268 Scrn1-001 54505890-54566489 protein_coding
  ENSMUST00000124325 Scrn1-002 54509108-54514817 retained_intron
  ENSMUST00000129744 Scrn1-003 54534525-54554455 protein_coding
  ENSMUST00000140235 Scrn1-004 54551718-54554446 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019268ENSMUST00000124325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019268 3.966±1.82 6.861±0.56 3.357±0.70 17.067±9.31 0.870±0.16 1.332±0.19 1.277±0.26 0.819±0.10 0.049±0.04 4.219±0.50 0.291±0.07 4.153±1.02 1.889±1.05 1.748±0.43
ENSMUST00000124325 N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A 0.746±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZO CIL_0003ZO_0002 CGP 6:54429603-54566489
CIL_0003ZB CIL_0003ZB_0002 CGP 6:54505890-54597344

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0006887 ISS exocytosis
GO:0008150 ND biological_process
GO:0016805 IEA dipeptidase activity
GO:0031965 IEA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000136193 SCRN1 secernin 1 protein_coding Homo_sapiens

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