C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122574-ENSG00000136193 CGP 9606 7:29806486-29990289
GeneTranscriptPositionBiotype
ENSG00000122574 (WIPF3)
WAS/WASL interacting protein family, member 3 		ENST00000242140 (WIPF3-201) 29806554-29917066 protein_coding
ENST00000409123 (WIPF3-001) 29806486-29906175 protein_coding
ENST00000409290 (WIPF3-002) 29834725-29917066 protein_coding
ENSG00000136193 (SCRN1)
secernin 1 		ENST00000242059 (SCRN1-001) 29920103-29989798 protein_coding
ENST00000409497 (SCRN1-002) 29923674-29969271 protein_coding
ENST00000409570 (SCRN1-007) 29947199-29989730 protein_coding
ENST00000421434 (SCRN1-003) 29940684-29990205 protein_coding
ENST00000425819 (SCRN1-009) 29923562-29989712 protein_coding
ENST00000426154 (SCRN1-201) 29920104-29990118 protein_coding
ENST00000434476 (SCRN1-005) 29923857-29990289 protein_coding
ENST00000438497 (SCRN1-006) 29944097-29969938 protein_coding
ENST00000494620 (SCRN1-004) 29944044-29990072 processed_transcript
ENSG00000227014 (AC007285.6)
 ENST00000419103 (AC007285.6-001) 29988600-30025660 antisense
ENST00000422239 (AC007285.6-002) 29988600-30025600 antisense
ENSG00000238906 (snoU13)
Small nucleolar RNA U13 		ENST00000459368 (snoU13.1-223) 29912528-29912632 snoRNA
CIL_0003ZO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000086040-ENSMUSG00000019124 CGP 10090 6:54429603-54566489
GeneTranscriptPositionBiotype
ENSMUSG00000019124 (Scrn1)
secernin 1 		ENSMUST00000019268 (Scrn1-001) 54505890-54566489 protein_coding
ENSMUST00000124325 (Scrn1-002) 54509108-54514817 retained_intron
ENSMUST00000129744 (Scrn1-003) 54534525-54554455 protein_coding
ENSMUST00000140235 (Scrn1-004) 54551718-54554446 processed_transcript
ENSMUSG00000086040 (Wipf3)
WAS/WASL interacting protein family, member 3 		ENSMUST00000126637 (Wipf3-002) 54429603-54503765 protein_coding
ENSMUST00000128480 (Wipf3-004) 54472002-54485360 processed_transcript
ENSMUST00000131043 (Wipf3-003) 54487906-54491542 retained_intron
ENSMUST00000132855 (Wipf3-001) 54429603-54503765 protein_coding
ENSMUST00000163746 (Wipf3-201) 54452883-54503768 protein_coding
ENSMUST00000172046 (Wipf3-202) 54452883-54503768 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZO_0001ENSG00000122574ENST00000242140ENST00000409123ENST00000409290ENSG00000136193ENST00000242059ENST00000409497ENST00000409570ENST00000421434ENST00000425819ENST00000426154ENST00000434476ENST00000438497ENST00000494620ENSG00000227014ENST00000419103ENST00000422239ENSG00000238906ENST00000459368CIL_0003ZO_0002ENSMUSG00000019124ENSMUST00000019268ENSMUST00000124325ENSMUST00000129744ENSMUST00000140235ENSMUSG00000086040ENSMUST00000126637ENSMUST00000128480ENSMUST00000131043ENSMUST00000132855ENSMUST00000163746ENSMUST00000172046
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZO_0001ENSG00000122574ENST00000242140ENST00000409123ENST00000409290ENSG00000136193ENST00000242059ENST00000421434ENST00000426154ENSG00000227014ENST00000419103ENST00000422239ENSG00000238906ENST00000459368CIL_0003ZO_0002ENSMUSG00000019124ENSMUST00000019268ENSMUST00000124325ENSMUSG00000086040ENSMUST00000126637ENSMUST00000132855ENSMUST00000163746ENSMUST00000172046
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122574 ENST00000242140 0.200±0.00 0.203±0.00 0.311±0.00 2.159±0.00 0.527±0.00 0.473±0.00 1.890±0.00 0.756±0.00 N/A 0.241±0.00 6.668±0.00 11.126±8.54 N/A 3.898±0.00
ENST00000409123 N/A N/A N/A N/A 0.172±0.00 N/A 0.082±0.00 N/A 0.395±0.00 N/A N/A 0.020±0.00 N/A 2.023±0.00
ENST00000409290 0.860±0.00 1.601±0.00 N/A 9.425±7.39 0.677±0.55 0.504±0.15 0.412±0.24 3.206±0.00 0.388±0.23 0.419±0.32 5.224±2.29 8.273±7.94 0.316±0.08 18.700±4.57
ENSG00000136193 ENST00000242059 5.477±0.00 5.052±0.00 N/A 36.866±10.21 2.680±0.13 6.242±5.47 1.903±0.88 4.518±4.41 4.711±4.09 4.054±1.06 1.203±0.00 7.602±5.83 2.365±0.30 5.772±1.21
ENST00000409497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421434 N/A N/A N/A N/A N/A N/A N/A 1.815±0.00 N/A N/A N/A N/A N/A N/A
ENST00000425819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426154 N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227014 ENST00000419103 N/A N/A N/A 0.200±0.16 0.070±0.00 N/A N/A N/A 0.395±0.00 N/A N/A N/A N/A 0.119±0.00
ENST00000422239 N/A 0.095±0.00 N/A N/A 0.024±0.00 N/A 0.067±0.00 N/A N/A N/A N/A 0.058±0.00 0.057±0.02 0.086±0.00
ENSG00000238906 ENST00000459368 N/A N/A N/A 0.738±0.00 N/A N/A 0.168±0.00 0.725±0.00 N/A N/A N/A N/A N/A 2.510±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019124 ENSMUST00000019268 3.966±1.82 6.861±0.56 3.357±0.70 17.067±9.31 0.870±0.16 1.332±0.19 1.277±0.26 0.819±0.10 0.049±0.04 4.219±0.50 0.291±0.07 4.153±1.02 1.889±1.05 1.748±0.43
ENSMUST00000124325 N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A 0.746±0.00 N/A N/A
ENSMUST00000129744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086040 ENSMUST00000126637 N/A 0.268±0.00 N/A N/A N/A N/A 0.664±0.01 N/A N/A 0.829±0.02 1.695±0.42 0.688±0.10 N/A N/A
ENSMUST00000128480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132855 N/A N/A N/A 1.554±0.00 0.245±0.00 N/A 1.458±0.16 N/A 0.290±0.00 1.130±0.17 2.389±1.18 0.774±0.12 2.751±2.14 N/A
ENSMUST00000163746 N/A N/A N/A 9.311±0.00 1.051±0.00 N/A 0.757±0.09 N/A N/A N/A 1.668±0.03 N/A N/A N/A
ENSMUST00000172046 0.369±0.00 N/A N/A 7.493±5.95 0.469±0.20 N/A 1.719±0.22 N/A 0.286±0.12 0.736±0.00 2.145±0.53 1.981±0.00 4.315±3.80 N/A

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