C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secernin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019268 Scrn1-001 ENSMUSG00000019124 10090 - 6:54505890-54566489 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019268 3.966±1.82 6.861±0.56 3.357±0.70 17.067±9.31 0.870±0.16 1.332±0.19 1.277±0.26 0.819±0.10 0.049±0.04 4.219±0.50 0.291±0.07 4.153±1.02 1.889±1.05 1.748±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZO CIL_0003ZO_0002 CGP 6:54429603-54566489
CIL_0003ZB CIL_0003ZB_0002 CGP 6:54505890-54597344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0006887 ISS exocytosis
GO:0008150 ND biological_process
GO:0016805 IEA dipeptidase activity
GO:0031965 IEA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242059 SCRN1-001 protein_coding Homo_sapiens 0 1445
ENST00000409497 SCRN1-002 protein_coding Homo_sapiens 0 1445
ENST00000409570 SCRN1-007 protein_coding Homo_sapiens 0 390
ENST00000421434 SCRN1-003 protein_coding Homo_sapiens 0 767
ENST00000425819 SCRN1-009 protein_coding Homo_sapiens 0 1286
ENST00000426154 SCRN1-201 protein_coding Homo_sapiens 0 1441
ENST00000434476 SCRN1-005 protein_coding Homo_sapiens 0 1428
ENST00000438497 SCRN1-006 protein_coding Homo_sapiens 0 464
ENST00000494620 SCRN1-004 processed_transcript Homo_sapiens 0 490

Loading