C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 170
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019767 Ccdc170 10090 + 10:4482502-4562231 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019901 Ccdc170-201 4509872-4561111 protein_coding
  ENSMUST00000138112 Ccdc170-001 4482502-4562231 protein_coding
  ENSMUST00000145465 Ccdc170-002 4511543-4514312 protein_coding
  ENSMUST00000157064 Ccdc170-003 4532995-4541701 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019901ENSMUST00000138112ENSMUST00000145465ENSMUST00000157064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019901 N/A N/A N/A N/A 0.157±0.00 0.170±0.04 N/A N/A 0.006±0.00 N/A 0.104±0.06 3.911±0.00 3.457±2.00 0.090±0.00
ENSMUST00000138112 0.386±0.22 0.138±0.05 0.054±0.00 0.155±0.00 0.276±0.18 0.125±0.05 0.059±0.02 N/A 0.009±0.00 0.900±0.05 0.059±0.02 0.712±0.35 1.449±0.00 0.224±0.04
ENSMUST00000145465 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.620±0.00
ENSMUST00000157064 N/A 0.098±0.00 N/A N/A N/A 0.265±0.19 N/A 1.590±0.00 N/A N/A 0.289±0.00 0.878±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EC CIL_0005EC_0002 CGP 10:4432467-4562231
CIL_0005EH CIL_0005EH_0002 CGP 10:4482502-5005614

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016161 ccdc170 coiled-coil domain containing 170 protein_coding Danio_rerio
ENSG00000120262 CCDC170 coiled-coil domain containing 170 protein_coding Homo_sapiens

Loading