C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005EC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146476-ENSG00000120262 CGP 9606 6:151452258-151621193
GeneTranscriptPositionBiotype
ENSG00000120262 (CCDC170)
coiled-coil domain containing 170 		ENST00000239374 (CCDC170-001) 151494030-151621193 protein_coding
ENST00000537358 (CCDC170-003) 151593028-151615520 retained_intron
ENST00000544131 (CCDC170-002) 151536271-151544694 processed_transcript
ENSG00000146476 (C6orf211)
chromosome 6 open reading frame 211 		ENST00000367294 (C6orf211-001) 151452287-151470101 protein_coding
ENST00000483931 (C6orf211-003) 151452524-151464566 processed_transcript
ENST00000494826 (C6orf211-002) 151452486-151468542 nonsense_mediated_decay
ENST00000545879 (C6orf211-201) 151452258-151470097 protein_coding
CIL_0005EC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061759-ENSMUSG00000019767 CGP 10090 10:4432467-4562231
GeneTranscriptPositionBiotype
ENSMUSG00000019767 (Ccdc170)
coiled-coil domain containing 170 		ENSMUST00000019901 (Ccdc170-201) 4509872-4561111 protein_coding
ENSMUST00000138112 (Ccdc170-001) 4482502-4562231 protein_coding
ENSMUST00000145465 (Ccdc170-002) 4511543-4514312 protein_coding
ENSMUST00000157064 (Ccdc170-003) 4532995-4541701 processed_transcript
ENSMUSG00000061759 (1700052N19Rik)
RIKEN cDNA 1700052N19 gene 		ENSMUST00000095893 (1700052N19Rik-001) 4432467-4455141 protein_coding
ENSMUST00000117489 (1700052N19Rik-003) 4432620-4439973 protein_coding
ENSMUST00000118544 (1700052N19Rik-002) 4432513-4455140 protein_coding
ENSMUST00000131636 (1700052N19Rik-005) 4434581-4440469 processed_transcript
ENSMUST00000134484 (1700052N19Rik-007) 4432635-4435174 retained_intron
ENSMUST00000143037 (1700052N19Rik-004) 4432627-4450412 processed_transcript
ENSMUST00000152294 (1700052N19Rik-006) 4432640-4453958 nonsense_mediated_decay
ENSMUSG00000065371 (Gm22739)
predicted gene, 22739 		ENSMUST00000083437 (Gm22739-201) 4484234-4484393 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EC_0001ENSG00000120262ENST00000239374ENST00000537358ENST00000544131ENSG00000146476ENST00000367294ENST00000483931ENST00000494826ENST00000545879CIL_0005EC_0002ENSMUSG00000019767ENSMUST00000019901ENSMUST00000138112ENSMUST00000145465ENSMUST00000157064ENSMUSG00000061759ENSMUST00000095893ENSMUST00000117489ENSMUST00000118544ENSMUST00000131636ENSMUST00000134484ENSMUST00000143037ENSMUST00000152294ENSMUSG00000065371ENSMUST00000083437
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EC_0001ENSG00000120262ENST00000239374ENST00000537358ENST00000544131ENSG00000146476ENST00000367294ENST00000545879CIL_0005EC_0002ENSMUSG00000019767ENSMUST00000019901ENSMUST00000138112ENSMUST00000145465ENSMUST00000157064ENSMUSG00000061759ENSMUST00000095893ENSMUST00000117489ENSMUST00000118544ENSMUST00000143037ENSMUST00000152294ENSMUSG00000065371ENSMUST00000083437
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120262 ENST00000239374 0.751±0.00 0.116±0.00 0.107±0.00 0.162±0.00 1.178±0.76 N/A 0.069±0.00 N/A N/A 3.978±0.00 N/A 1.439±1.70 1.635±0.00 2.651±1.30
ENST00000537358 N/A N/A N/A N/A N/A 0.216±0.00 N/A 0.568±0.00 N/A 4.445±0.00 N/A 0.192±0.00 4.426±0.00 17.153±0.00
ENST00000544131 N/A N/A N/A N/A N/A N/A 0.285±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000146476 ENST00000367294 2.107±0.00 0.823±0.00 2.129±0.00 7.798±0.00 5.053±1.03 4.137±0.18 4.057±0.56 5.835±0.98 5.391±0.32 3.626±2.31 1.213±0.16 10.013±4.59 6.710±3.18 5.188±0.99
ENST00000483931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545879 1.819±0.00 2.644±0.00 N/A 3.230±0.00 N/A 1.646±0.00 N/A 10.009±0.00 1.935±0.00 1.793±0.00 1.222±0.00 N/A N/A 2.038±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019767 ENSMUST00000019901 N/A N/A N/A N/A 0.157±0.00 0.170±0.04 N/A N/A 0.006±0.00 N/A 0.104±0.06 3.911±0.00 3.457±2.00 0.090±0.00
ENSMUST00000138112 0.386±0.22 0.138±0.05 0.054±0.00 0.155±0.00 0.276±0.18 0.125±0.05 0.059±0.02 N/A 0.009±0.00 0.900±0.05 0.059±0.02 0.712±0.35 1.449±0.00 0.224±0.04
ENSMUST00000145465 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.620±0.00
ENSMUST00000157064 N/A 0.098±0.00 N/A N/A N/A 0.265±0.19 N/A 1.590±0.00 N/A N/A 0.289±0.00 0.878±0.00 N/A N/A
ENSMUSG00000061759 ENSMUST00000095893 3.032±0.65 1.721±0.00 4.725±0.50 3.970±0.79 3.054±2.13 2.046±1.38 1.706±0.56 1.965±0.62 6.684±3.03 2.070±0.89 5.831±0.50 2.711±0.87 4.396±1.44 27.505±14.22
ENSMUST00000117489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.102±2.04 17.555±0.00
ENSMUST00000118544 0.615±0.21 0.906±0.24 0.980±0.35 0.700±0.17 1.181±0.32 1.132±0.08 0.276±0.05 0.555±0.08 0.990±0.42 0.638±0.14 0.687±0.06 1.452±0.45 0.719±0.07 N/A
ENSMUST00000131636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143037 N/A N/A N/A N/A 1.490±0.00 N/A 0.392±0.04 N/A N/A 0.724±0.00 N/A 1.180±0.14 N/A N/A
ENSMUST00000152294 N/A N/A N/A 11.972±0.00 N/A N/A N/A N/A N/A N/A N/A 10.429±0.00 12.685±5.12 45.624±0.00
ENSMUSG00000065371 ENSMUST00000083437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A

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