C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuromedin B receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019865 Nmbr 10090 + 10:14705591-14770850 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020015 Nmbr-001 14760157-14770850 protein_coding
  ENSMUST00000186175 Nmbr-005 14705627-14720451 retained_intron
  ENSMUST00000186382 Nmbr-007 14760219-14770583 nonsense_mediated_decay
  ENSMUST00000187449 Nmbr-004 14705597-14753324 processed_transcript
  ENSMUST00000188021 Nmbr-006 14705609-14759019 processed_transcript
  ENSMUST00000190114 Nmbr-002 14705621-14767296 protein_coding
  ENSMUST00000190751 Nmbr-008 14760219-14770583 protein_coding
  ENSMUST00000191238 Nmbr-003 14705591-14766771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000020015ENSMUST00000186175ENSMUST00000186382ENSMUST00000187449ENSMUST00000190114ENSMUST00000190751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000020015 0.040±0.00 N/A 0.030±0.01 0.271±0.00 0.049±0.00 N/A 0.100±0.04 0.061±0.03 0.030±0.02 0.036±0.00 0.253±0.10 0.071±0.00 0.035±0.01
ENSMUST00000186175 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.01 N/A 0.300±0.00 0.099±0.00 N/A
ENSMUST00000186382 N/A N/A N/A N/A N/A 0.116±0.00 0.075±0.00 N/A 0.063±0.02 0.092±0.00 0.136±0.03 N/A 0.043±0.02
ENSMUST00000187449 N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A 0.383±0.29 0.115±0.00
ENSMUST00000190114 N/A N/A 0.088±0.00 0.459±0.00 N/A N/A 0.186±0.00 0.077±0.06 0.069±0.02 0.081±0.03 0.337±0.19 0.029±0.00 0.036±0.00
ENSMUST00000190751 0.055±0.02 0.067±0.01 0.035±0.01 N/A 0.034±0.00 0.065±0.01 0.031±0.00 0.076±0.00 0.045±0.00 N/A 0.224±0.00 0.143±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030N CIL_00030N_0003 CGP 10:14705591-14770850

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004946 IEA bombesin receptor activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0031989 IEA bombesin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054152 nmbr neuromedin B receptor protein_coding Danio_rerio
ENSG00000135577 NMBR neuromedin B receptor protein_coding Homo_sapiens

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