C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lin-7 homolog A (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019906 Lin7a 10090 + 10:107271843-107425143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020057 Lin7a-201 107271843-107425143 protein_coding
  ENSMUST00000105280 Lin7a-202 107271843-107425143 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020057ENSMUST00000105280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020057 0.518±0.25 0.069±0.03 0.416±0.03 3.412±0.85 0.276±0.08 0.259±0.06 0.197±0.03 0.726±0.19 1.472±1.25 0.025±0.01 0.347±0.08 0.215±0.13 0.041±0.04 9.015±4.94
ENSMUST00000105280 0.299±0.17 0.016±0.01 0.047±0.00 0.752±0.00 0.137±0.10 0.096±0.00 0.030±0.00 0.385±0.17 0.768±0.53 0.007±0.00 0.255±0.13 0.066±0.00 0.020±0.01 3.460±2.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005923 IEA tight junction
GO:0006887 IEA exocytosis
GO:0007269 IGI neurotransmitter secretion
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016323 IDA basolateral plasma membrane
GO:0030165 IEA PDZ domain binding
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0048489 IMP synaptic vesicle transport
GO:0048839 IDA inner ear development
GO:0070062 IEA extracellular vesicular exosome
GO:0097016 IEA L27 domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013414 lin7a lin-7 homolog A (C. elegans) protein_coding Danio_rerio
ENSG00000111052 LIN7A lin-7 homolog A (C. elegans) protein_coding Homo_sapiens

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