C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloblastosis oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020158 Myb-001 ENSMUSG00000019982 10090 - 10:21125276-21160905 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020158 0.629±0.44 0.028±0.00 0.050±0.00 0.537±0.33 2.429±1.03 11.235±3.29 0.063±0.03 0.080±0.07 7.351±0.84 1.701±0.16 0.028±0.01 0.975±0.49 2.303±2.36 0.083±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0002 VISTA 10:20781770-21384133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001701 IMP in utero embryonic development
GO:0003677 IDA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 IDA cytosol
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006816 IMP calcium ion transport
GO:0010468 IMP regulation of gene expression
GO:0030183 IMP B cell differentiation
GO:0045624 IEA positive regulation of T-helper cell differentiation
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IMP thymus development
GO:0048566 IMP embryonic digestive tract development
GO:0048872 IMP homeostasis of number of cells
GO:0051571 IEA positive regulation of histone H3-K4 methylation
GO:0051574 IEA positive regulation of histone H3-K9 methylation
GO:0071354 IDA cellular response to interleukin-6
GO:0071987 IDA WD40-repeat domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316528 MYB-201 protein_coding Homo_sapiens 0 2200
ENST00000339290 MYB-013 nonsense_mediated_decay Homo_sapiens 0 1803
ENST00000341911 MYB-002 protein_coding Homo_sapiens 0 1731
ENST00000367812 MYB-006 nonsense_mediated_decay Homo_sapiens 0 2200
ENST00000367814 MYB-001 protein_coding Homo_sapiens 0 2974
ENST00000420123 MYB-005 protein_coding Homo_sapiens 0 856
ENST00000430686 MYB-004 protein_coding Homo_sapiens 0 955
ENST00000438901 MYB-020 nonsense_mediated_decay Homo_sapiens 0 1415
ENST00000442647 MYB-009 protein_coding Homo_sapiens 0 2933
ENST00000463282 MYB-007 nonsense_mediated_decay Homo_sapiens 0 1626
ENST00000524588 MYB-035 nonsense_mediated_decay Homo_sapiens 0 1485
ENST00000525002 MYB-031 nonsense_mediated_decay Homo_sapiens 0 1860
ENST00000525369 MYB-014 protein_coding Homo_sapiens 0 1243
ENST00000525477 MYB-008 nonsense_mediated_decay Homo_sapiens 0 1626
ENST00000525514 MYB-019 nonsense_mediated_decay Homo_sapiens 0 1182
ENST00000525940 MYB-015 nonsense_mediated_decay Homo_sapiens 0 1351
ENST00000526187 MYB-024 nonsense_mediated_decay Homo_sapiens 0 1310
ENST00000526320 MYB-029 nonsense_mediated_decay Homo_sapiens 0 1351
ENST00000526565 MYB-036 nonsense_mediated_decay Homo_sapiens 0 1120
ENST00000526889 MYB-030 nonsense_mediated_decay Homo_sapiens 0 1526
ENST00000527615 MYB-041 protein_coding Homo_sapiens 0 2278
ENST00000528015 MYB-023 nonsense_mediated_decay Homo_sapiens 0 1352
ENST00000528140 MYB-037 nonsense_mediated_decay Homo_sapiens 0 1351
ENST00000528343 MYB-033 nonsense_mediated_decay Homo_sapiens 0 1860
ENST00000528345 MYB-016 nonsense_mediated_decay Homo_sapiens 0 1070
ENST00000528774 MYB-038 protein_coding Homo_sapiens 0 1454
ENST00000529262 MYB-022 nonsense_mediated_decay Homo_sapiens 0 1308
ENST00000529586 MYB-034 nonsense_mediated_decay Homo_sapiens 0 1182
ENST00000531519 MYB-027 nonsense_mediated_decay Homo_sapiens 0 1182
ENST00000531634 MYB-026 nonsense_mediated_decay Homo_sapiens 0 1070
ENST00000531737 MYB-028 nonsense_mediated_decay Homo_sapiens 0 1351
ENST00000531845 MYB-003 processed_transcript Homo_sapiens 0 1626
ENST00000533384 MYB-025 nonsense_mediated_decay Homo_sapiens 0 1496
ENST00000533624 MYB-021 protein_coding Homo_sapiens 0 1064
ENST00000533808 MYB-032 nonsense_mediated_decay Homo_sapiens 0 1496
ENST00000533837 MYB-010 nonsense_mediated_decay Homo_sapiens 0 1731
ENST00000534044 MYB-017 protein_coding Homo_sapiens 0 1857
ENST00000534121 MYB-039 protein_coding Homo_sapiens 0 1415
ENST00000534736 MYB-040 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000616088 MYB-202 protein_coding Homo_sapiens 0 2200
ENST00000618728 MYB-203 protein_coding Homo_sapiens 0 2329

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