C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 7B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019990 Pde7b 10090 - 10:20398004-20725078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020165 Pde7b-001 20398004-20725078 protein_coding
  ENSMUST00000164195 Pde7b-005 20407087-20548470 protein_coding
  ENSMUST00000166147 Pde7b-002 20616813-20725032 retained_intron
  ENSMUST00000169016 Pde7b-003 20398928-20548328 nonsense_mediated_decay
  ENSMUST00000169404 Pde7b-004 20400418-20548328 protein_coding
  ENSMUST00000170265 Pde7b-006 20400418-20724696 protein_coding
  ENSMUST00000170683 Pde7b-007 20479627-20725032 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020165ENSMUST00000164195ENSMUST00000169016ENSMUST00000170265
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020165 2.690±0.57 1.111±0.73 1.254±0.00 3.355±4.27 2.268±1.01 1.169±0.60 2.825±0.71 2.632±0.84 0.672±0.53 4.263±1.46 4.518±1.46 5.026±1.49 0.060±0.05 0.077±0.03
ENSMUST00000164195 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A
ENSMUST00000169016 1.607±0.35 2.570±0.56 N/A 0.304±0.01 3.359±1.66 1.853±0.40 1.515±0.59 1.877±0.48 0.996±0.43 5.590±2.29 N/A 9.368±2.18 0.089±0.01 0.207±0.04
ENSMUST00000170265 N/A N/A N/A N/A 2.131±0.02 N/A N/A N/A 0.114±0.02 N/A N/A N/A N/A 0.322±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0002 VISTA 10:20184902-20788767

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004115 IDA 3',5'-cyclic-AMP phosphodiesterase activity
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171408 PDE7B phosphodiesterase 7B protein_coding Homo_sapiens

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