C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169016 Pde7b-003 ENSMUSG00000019990 10090 - 10:20398928-20548328 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000169016
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000169016 1.607±0.35 2.570±0.56 0.304±0.01 3.359±1.66 1.853±0.40 1.515±0.59 1.877±0.48 0.996±0.43 5.590±2.29 9.368±2.18 0.089±0.01 0.207±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0002 VISTA 10:20184902-20788767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004115 IDA 3',5'-cyclic-AMP phosphodiesterase activity
GO:0008152 IDA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124317 pde7a-201 protein_coding Danio_rerio 0 213
ENSDART00000138741 pde7a-001 protein_coding Danio_rerio 0 213
ENST00000308191 PDE7B-001 protein_coding Homo_sapiens 0 1476
ENST00000446774 PDE7B-002 protein_coding Homo_sapiens 0 507
ENST00000615259 PDE7B-201 protein_coding Homo_sapiens 0 1476

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