C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000879_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm140 VISTA 9606 6:135802414-136405223
GeneTranscriptPositionBiotype
ENSG00000135525 (MAP7)
microtubule-associated protein 7 		ENST00000354570 (MAP7-001) 136342737-136550819 protein_coding
ENST00000432797 (MAP7-201) 136342281-136526606 protein_coding
ENST00000438100 (MAP7-002) 136343819-136525983 protein_coding
ENST00000454590 (MAP7-003) 136343543-136526472 protein_coding
ENST00000544465 (MAP7-004) 136343782-136466875 protein_coding
ENST00000611373 (MAP7-005) 136343840-136526660 protein_coding
ENST00000616617 (MAP7-202) 136342281-136550819 protein_coding
ENST00000617204 (MAP7-203) 136342281-136526213 protein_coding
ENST00000618822 (MAP7-204) 136342281-136550819 protein_coding
ENSG00000146410 (MTFR2)
mitochondrial fission regulator 2 		ENST00000367784 (MTFR2-003) 136231030-136250292 nonsense_mediated_decay
ENST00000418509 (MTFR2-006) 136239470-136250294 protein_coding
ENST00000420702 (MTFR2-002) 136231030-136250311 protein_coding
ENST00000445767 (MTFR2-004) 136247462-136250299 processed_transcript
ENST00000451457 (MTFR2-001) 136231024-136250324 protein_coding
ENST00000527338 (MTFR2-005) 136248691-136250335 retained_intron
ENST00000532958 (MTFR2-007) 136233144-136239546 protein_coding
ENSG00000171408 (PDE7B)
phosphodiesterase 7B 		ENST00000308191 (PDE7B-001) 135851696-136195574 protein_coding
ENST00000446774 (PDE7B-002) 136149086-136156075 protein_coding
ENST00000615259 (PDE7B-201) 136038291-136195565 protein_coding
ENSG00000213111 (COX5BP2)
cytochrome c oxidase subunit Vb pseudogene 2 		ENST00000392354 (COX5BP2-001) 136034553-136034886 transcribed_processed_pseudogene
ENST00000576956 (COX5BP2-002) 136034031-136035155 processed_transcript
ENSG00000216519 (RP3-406A7.1)
 ENST00000403956 (RP3-406A7.1-001) 136317961-136318236 processed_pseudogene
ENSG00000220660 (RP3-406A7.3)
 ENST00000407767 (RP3-406A7.3-001) 136364129-136364462 transcribed_processed_pseudogene
ENST00000571188 (RP3-406A7.3-002) 136364419-136365079 processed_transcript
ENSG00000222121 (AL512290.1)
 ENST00000410189 (AL512290.1-201) 135977811-135977903 miRNA
ENSG00000227844 (RP13-143G15.3)
 ENST00000413745 (RP13-143G15.3-002) 136044464-136064638 antisense
ENST00000419926 (RP13-143G15.3-001) 136043852-136072827 antisense
ENSG00000236378 (RP11-394G3.2)
 ENST00000447848 (RP11-394G3.2-001) 135807148-135808466 lincRNA
ENSG00000260418 (RP3-406A7.7)
 ENST00000564248 (RP3-406A7.7-001) 136335714-136336087 lincRNA
ENSG00000277973 (RP11-472E5.3)
 ENST00000615812 (RP11-472E5.3-001) 136206478-136206860 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_000879_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm140 VISTA 10090 10:20184902-20788767
GeneTranscriptPositionBiotype
ENSMUSG00000019990 (Pde7b)
phosphodiesterase 7B 		ENSMUST00000020165 (Pde7b-001) 20398004-20725078 protein_coding
ENSMUST00000164195 (Pde7b-005) 20407087-20548470 protein_coding
ENSMUST00000166147 (Pde7b-002) 20616813-20725032 retained_intron
ENSMUST00000169016 (Pde7b-003) 20398928-20548328 nonsense_mediated_decay
ENSMUST00000169404 (Pde7b-004) 20400418-20548328 protein_coding
ENSMUST00000170265 (Pde7b-006) 20400418-20724696 protein_coding
ENSMUST00000170683 (Pde7b-007) 20479627-20725032 retained_intron
ENSMUSG00000019992 (Mtfr2)
mitochondrial fission regulator 2 		ENSMUST00000169712 (Mtfr2-201) 20347819-20361669 protein_coding
ENSMUSG00000019996 (Map7)
microtubule-associated protein 7 		ENSMUST00000020173 (Map7-201) 20148471-20278699 protein_coding
ENSMUST00000116259 (Map7-202) 20148920-20281589 protein_coding
ENSMUSG00000037608 (Bclaf1)
BCL2-associated transcription factor 1 		ENSMUST00000043881 (Bclaf1-002) 20312484-20342499 protein_coding
ENSMUST00000092678 (Bclaf1-201) 20312469-20342501 protein_coding
ENSMUST00000185800 (Bclaf1-008) 20312537-20340263 protein_coding
ENSMUST00000186100 (Bclaf1-001) 20312472-20340266 nonsense_mediated_decay
ENSMUST00000187338 (Bclaf1-006) 20312528-20322595 retained_intron
ENSMUST00000188546 (Bclaf1-004) 20333254-20340206 retained_intron
ENSMUST00000189158 (Bclaf1-007) 20326045-20332258 nonsense_mediated_decay
ENSMUST00000190156 (Bclaf1-009) 20312529-20340262 nonsense_mediated_decay
ENSMUST00000191143 (Bclaf1-003) 20329049-20333890 retained_intron
ENSMUST00000191438 (Bclaf1-005) 20323720-20344613 nonsense_mediated_decay
ENSMUSG00000068638 (4930403O15Rik)
RIKEN cDNA 4930403O15 gene 		ENSMUST00000097355 (4930403O15Rik-001) 20515327-20518164 processed_transcript
ENSMUSG00000069713 (4933406P04Rik)
RIKEN cDNA 4933406P04 gene 		ENSMUST00000092680 (4933406P04Rik-201) 20310506-20312294 protein_coding
ENSMUSG00000091730 (Gm17230)
predicted gene 17230 		ENSMUST00000171194 (Gm17230-001) 20625635-20629576 processed_pseudogene
ENSMUSG00000092051 (Gm17229)
predicted gene 17229 		ENSMUST00000166792 (Gm17229-001) 20518011-20519768 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135525 ENST00000354570 0.714±0.00 0.583±0.00 1.514±0.00 10.614±0.00 1.924±0.35 2.945±0.79 0.331±0.23 2.850±1.72 1.202±0.63 2.278±0.00 N/A 8.265±9.42 3.525±0.77 5.395±2.93
ENST00000432797 N/A N/A N/A 1.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438100 N/A N/A 1.775±0.00 7.718±3.88 N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A 0.905±0.00 3.581±0.00
ENST00000454590 0.482±0.00 N/A N/A 3.844±0.97 N/A N/A 0.304±0.00 N/A N/A N/A 0.091±0.00 N/A N/A N/A
ENST00000544465 N/A N/A N/A N/A N/A 3.446±0.00 N/A N/A N/A 0.350±0.00 N/A 4.228±3.00 N/A N/A
ENST00000611373 0.599±0.00 N/A N/A N/A 1.352±0.00 N/A N/A 1.733±0.00 N/A 1.156±0.00 0.016±0.00 18.200±0.00 1.890±0.86 13.111±4.91
ENST00000616617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617204 N/A N/A N/A 1.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618822 N/A 0.114±0.00 N/A N/A 1.090±0.00 1.529±0.00 N/A 1.123±0.00 0.399±0.00 N/A N/A 1.212±0.68 N/A N/A
ENSG00000146410 ENST00000367784 N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.356±0.00
ENST00000418509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.498±0.00 N/A 2.699±0.00
ENST00000420702 0.082±0.00 N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A 2.326±2.16 0.618±0.32 1.050±0.67
ENST00000445767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451457 N/A 0.366±0.00 N/A 0.025±0.00 0.176±0.00 0.314±0.28 N/A 0.209±0.00 0.044±0.00 0.362±0.00 N/A 3.763±0.68 0.371±0.12 2.545±0.00
ENST00000527338 0.107±0.00 N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532958 N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A
ENSG00000171408 ENST00000308191 0.297±0.00 0.398±0.00 4.480±0.00 3.701±2.34 0.399±0.16 0.575±0.25 0.957±0.63 0.731±0.16 1.144±1.02 0.433±0.00 0.882±0.00 0.618±0.09 0.098±0.00 0.314±0.00
ENST00000446774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615259 1.007±0.00 2.516±0.00 N/A 0.994±0.00 0.793±0.41 0.502±0.17 1.363±0.00 1.027±0.19 0.988±0.17 0.339±0.15 0.356±0.00 2.267±1.81 0.426±0.25 1.079±0.56
ENSG00000213111 ENST00000392354 N/A 0.040±0.00 0.853±0.00 0.670±0.00 N/A N/A 0.119±0.00 0.213±0.00 1.947±1.80 1.345±0.00 2.276±0.00 1.242±0.00 N/A N/A
ENST00000576956 N/A 0.011±0.00 0.053±0.00 0.203±0.00 N/A N/A 0.090±0.00 0.073±0.00 N/A 0.335±0.00 N/A 0.143±0.02 N/A 0.046±0.02
ENSG00000216519 ENST00000403956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A 0.183±0.00
ENSG00000220660 ENST00000407767 N/A 0.054±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.901±0.13
ENST00000571188 N/A N/A N/A 0.118±0.00 N/A 0.042±0.00 N/A 0.499±0.29 N/A N/A N/A N/A N/A 1.051±0.05
ENSG00000222121 ENST00000410189 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A
ENSG00000227844 ENST00000413745 0.023±0.00 N/A N/A 0.087±0.00 N/A N/A 0.216±0.00 0.078±0.00 N/A N/A N/A 0.015±0.00 0.023±0.00 N/A
ENST00000419926 N/A 0.036±0.00 0.886±0.00 N/A 0.059±0.02 N/A 0.140±0.00 N/A N/A 0.101±0.06 0.492±0.00 0.013±0.00 N/A 0.011±0.00
ENSG00000236378 ENST00000447848 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.015±0.00 0.042±0.00 N/A N/A N/A 0.390±0.20
ENSG00000260418 ENST00000564248 0.215±0.00 0.114±0.00 N/A 2.996±2.12 1.293±0.00 1.899±0.17 N/A 3.693±0.00 2.590±0.00 1.626±0.17 N/A 1.766±2.03 1.013±0.02 1.375±0.59
ENSG00000277973 ENST00000615812 N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019990 ENSMUST00000020165 2.690±0.57 1.111±0.73 1.254±0.00 3.355±4.27 2.268±1.01 1.169±0.60 2.825±0.71 2.632±0.84 0.672±0.53 4.263±1.46 4.518±1.46 5.026±1.49 0.060±0.05 0.077±0.03
ENSMUST00000164195 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A
ENSMUST00000166147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169016 1.607±0.35 2.570±0.56 N/A 0.304±0.01 3.359±1.66 1.853±0.40 1.515±0.59 1.877±0.48 0.996±0.43 5.590±2.29 N/A 9.368±2.18 0.089±0.01 0.207±0.04
ENSMUST00000169404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170265 N/A N/A N/A N/A 2.131±0.02 N/A N/A N/A 0.114±0.02 N/A N/A N/A N/A 0.322±0.14
ENSMUST00000170683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000019992 ENSMUST00000169712 0.484±0.37 0.286±0.12 0.209±0.06 0.735±0.54 0.254±0.13 0.626±0.42 0.121±0.02 0.126±0.04 4.921±5.16 0.223±0.05 0.032±0.01 1.343±0.58 2.453±1.67 3.158±1.67
ENSMUSG00000019996 ENSMUST00000020173 N/A N/A N/A 9.402±0.00 N/A N/A N/A N/A N/A N/A 0.296±0.00 2.191±0.00 2.025±0.30 29.985±23.87
ENSMUST00000116259 0.507±0.01 1.443±0.20 2.089±0.42 2.620±1.43 0.842±0.35 10.354±1.37 1.133±0.50 5.324±2.26 2.140±0.75 1.933±0.52 0.631±0.25 1.387±0.87 4.036±1.51 N/A
ENSMUSG00000037608 ENSMUST00000043881 4.222±2.29 2.812±0.00 18.645±1.43 17.326±8.93 3.265±0.45 2.272±1.18 2.712±1.02 2.400±1.34 6.770±4.39 6.144±1.70 4.045±1.30 12.034±8.34 7.078±2.57 3.100±1.36
ENSMUST00000092678 5.836±2.51 4.936±1.74 N/A N/A 6.847±1.81 3.596±1.98 2.538±1.10 2.633±1.31 3.753±1.85 5.130±1.48 1.861±0.48 10.900±3.43 4.026±1.14 1.626±0.31
ENSMUST00000185800 N/A N/A N/A 9.287±0.00 4.401±0.00 N/A N/A N/A 7.827±0.00 N/A 1.844±0.20 14.927±3.15 13.731±9.56 5.779±3.76
ENSMUST00000186100 4.071±0.59 N/A N/A 5.571±0.00 N/A N/A 1.875±0.00 N/A 8.943±3.22 N/A N/A 11.417±0.00 6.776±3.39 2.876±1.35
ENSMUST00000187338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188546 N/A N/A N/A 57.089±0.00 N/A N/A N/A N/A N/A N/A N/A 116.381±0.00 65.846±22.87 92.780±0.00
ENSMUST00000189158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190156 N/A N/A N/A N/A N/A N/A N/A N/A 4.023±0.00 N/A N/A N/A N/A N/A
ENSMUST00000191143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.249±0.00 17.205±8.21 6.160±0.00
ENSMUSG00000068638 ENSMUST00000097355 0.083±0.03 0.189±0.08 0.205±0.08 0.142±0.05 0.260±0.25 0.284±0.05 0.198±0.04 0.091±0.06 0.132±0.07 0.118±0.07 0.040±0.02 0.230±0.13 0.130±0.08 1.783±0.92
ENSMUSG00000069713 ENSMUST00000092680 0.370±0.10 0.523±0.19 0.444±0.07 0.250±0.13 0.313±0.08 0.462±0.12 0.299±0.03 0.448±0.10 0.159±0.10 0.365±0.12 0.062±0.03 0.358±0.17 0.205±0.08 5.200±1.37
ENSMUSG00000091730 ENSMUST00000171194 0.028±0.01 0.013±0.00 N/A 0.014±0.00 0.102±0.02 0.039±0.00 0.029±0.01 0.043±0.03 0.069±0.06 0.029±0.00 0.021±0.00 0.230±0.19 0.016±0.00 0.133±0.06
ENSMUSG00000092051 ENSMUST00000166792 0.099±0.05 N/A 0.122±0.05 0.054±0.03 0.087±0.04 0.072±0.02 0.215±0.05 0.053±0.04 0.040±0.00 0.029±0.00 0.039±0.02 0.166±0.10 0.027±0.01 0.805±0.35

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