C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FYVE, RhoGEF and PH domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020021 Fgd6 10090 + 10:94036001-94145339 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020208 Fgd6-001 94036001-94145339 protein_coding
  ENSMUST00000125535 Fgd6-003 94133163-94139871 retained_intron
  ENSMUST00000141143 Fgd6-002 94072542-94089644 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020208 0.645±0.04 0.552±0.13 0.640±0.14 1.467±0.91 0.849±0.39 1.937±0.72 0.665±0.09 0.475±0.25 2.004±0.76 2.331±0.82 0.515±0.11 1.175±0.55 7.125±2.52 1.665±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045528 fgd6 FYVE, RhoGEF and PH domain containing 6 protein_coding Danio_rerio
ENSG00000180263 FGD6 FYVE, RhoGEF and PH domain containing 6 protein_coding Homo_sapiens

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